Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0485 |
Symbol | |
ID | 3736927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 470410 |
End bp | 471066 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637775076 |
Product | cytochrome b6 |
Protein accession | YP_380814 |
Protein GI | 78212035 |
COG category | [C] Energy production and conversion |
COG ID | [COG1290] Cytochrome b subunit of the bc complex |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.153664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.560509 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAACT CATCACCGGT TTACGACTGG TTCCAGGAAC GTCTGGAAAT CCAGGACATT GCTGACGACA TCGGTTCCAA ATACGTGCCC CCCCACGTCA ACATTTTCTA TTGCCTGGGG GGCATCACGT TGGTGTGCTT CCTGATCCAG TTCGCGACTG GGTTCGCGAT GACTTTCTAT TACAAGCCCA CTGTTGCTGA GGCTTACAAG TCGGTCGAAT ACCTGATGAC CGACGTCAGT TTCGGTTGGC TGATTCGCTC GGTTCACCGC TGGAGCGCAT CAATGATGGT GCTGATGCTC ATTCTTCACG TGTTCCGCGT GTACCTCACC GGCGGTTTTA AGCGTCCTCG TGAGCTCACC TGGGTCACCG GTGTGACCAT GGCCGTGATC ACCGTTTCCT TCGGCGTGAC CGGTTACTCC CTGCCTTGGG ATCAGGTTGG TTACTGGGCC GTGAAGATCG TTTCGGGCGT CCCTGCTGCC ATTCCGGTGG TTGGCGACTT CATGGTGGAG CTGCTTCGCG GTGGCGAAAG CGTCGGTCAG GCAACGCTCA CCCGCTTCTA CAGCCTTCAC ACCTTTGTGA TGCCTTGGCT GCTGGCAGTG TTCATGCTCA TGCACTTCCT GATGATCCGG AAGCAGGGCA TTTCTGGTCC CTTGTGA
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Protein sequence | MANSSPVYDW FQERLEIQDI ADDIGSKYVP PHVNIFYCLG GITLVCFLIQ FATGFAMTFY YKPTVAEAYK SVEYLMTDVS FGWLIRSVHR WSASMMVLML ILHVFRVYLT GGFKRPRELT WVTGVTMAVI TVSFGVTGYS LPWDQVGYWA VKIVSGVPAA IPVVGDFMVE LLRGGESVGQ ATLTRFYSLH TFVMPWLLAV FMLMHFLMIR KQGISGPL
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