Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0484 |
Symbol | |
ID | 3736926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 469065 |
End bp | 470249 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637775075 |
Product | carboxyl-terminal protease |
Protein accession | YP_380813 |
Protein GI | 78212034 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.165712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.591876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGTGCTAG GCAGCGCCTG CACTGCTGTT GCACTTAGCG ACACACAACA GCTCGTGGTG GACAGCTGGA GGCTTGTGAA CCAGGGCTTT TGGAACCCAG AACAACTCGA TGCGGTGCGT TGGAGGCGTC AACGGCAGAA GGCCATGGAA CGCAGCATCG AGAGCAGTGA CGACGCCTAT GCGGCCATCG AATCGATGCT GGCTCAGCTG GGCGACCCTT ACACCCGGCT GCTTCGTCCA GCGGACTACA CGGCGCTGAA AAACAGCACC AACGGCAGCC TCAGCGGTGT GGGCTTGCAA CTCGGGCCCG ATGAGAGCAG CAATGGCATT GTGGTGATTT CGGCCCTCGA GGGTTCACCC GCCGGCGAGG CAGAGATCAC CAGTGGCACG CAGTTGCTAT CTGTTGATGG CCGACCCGTG GTGGATCTGG GACTTGAGGG AACCGTTGCA GCACTTCGGG GAGACGTGGG ATCTCAGGTA GTGCTGACGC TGGACAACGG CAGCGGAGAA ACAACTGAAC TGACCCTGGA ACGCCGCAGC GTGGACCTCA GGCCGGTGCG AACCCGGCGC TTGCGCACCG GCAGTCACAC CCTTGGCTAT CTGCGGATCA CCCAGTTCAG CGACGGAGTC CCCGAACAGG TGAAAGAAGC CCTCACAGAG TTGCAAAACA AAGAGATCGA AGGATTGGTG CTCGACCTCC GCAACAACTC AGGCGGATTG GTGAGCGCTG GATTAGCAGT CGCAGACGAC TTCCTTTCCG GTGACGCCAT CGTTGAAACC CGCAACCGCG ATGGCATTAA TGACACCATC CAGGCCAGTC TCCAGACGGT GTACGACGGA CCGATGGTCA CCCTCGTGAA TGGAGGAACG GCCAGTGCGA GCGAAATCCT GGCTGGCGCC CTTCAGGACA ACGAACGCGC CACCCTGCTC GGAGGCCAGA CCTTTGGCAA AGGGCTGATT CAAACGCTGA CCAACCTCAG TGACGGCAGC GGCCTCGCCG TGACCGTCGC CGGCTACGTG ACGCCGAGTG GACGAGATAT TCAAGGAGAA GGCATCGCAC CGGATCGTGG GTTGTCAGAT CCGGAACCCC TGAATCCCGG CGGTGACGGT GATCGCTGGC TCTCGGAAGC CGAACAATGG ATGGAGGCCC TGCTGGAACA ACCCGCTGAC GACACCGAGG CATGA
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Protein sequence | MVLGSACTAV ALSDTQQLVV DSWRLVNQGF WNPEQLDAVR WRRQRQKAME RSIESSDDAY AAIESMLAQL GDPYTRLLRP ADYTALKNST NGSLSGVGLQ LGPDESSNGI VVISALEGSP AGEAEITSGT QLLSVDGRPV VDLGLEGTVA ALRGDVGSQV VLTLDNGSGE TTELTLERRS VDLRPVRTRR LRTGSHTLGY LRITQFSDGV PEQVKEALTE LQNKEIEGLV LDLRNNSGGL VSAGLAVADD FLSGDAIVET RNRDGINDTI QASLQTVYDG PMVTLVNGGT ASASEILAGA LQDNERATLL GGQTFGKGLI QTLTNLSDGS GLAVTVAGYV TPSGRDIQGE GIAPDRGLSD PEPLNPGGDG DRWLSEAEQW MEALLEQPAD DTEA
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