| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0484 |
|---|
| Symbol | |
|---|
| ID | 3736926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 469065 |
|---|
| End bp | 470249 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637775075 |
|---|
| Product | carboxyl-terminal protease |
|---|
| Protein accession | YP_380813 |
|---|
| Protein GI | 78212034 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.165712 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.591876 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTGCTAG GCAGCGCCTG CACTGCTGTT GCACTTAGCG ACACACAACA GCTCGTGGTG
GACAGCTGGA GGCTTGTGAA CCAGGGCTTT TGGAACCCAG AACAACTCGA TGCGGTGCGT
TGGAGGCGTC AACGGCAGAA GGCCATGGAA CGCAGCATCG AGAGCAGTGA CGACGCCTAT
GCGGCCATCG AATCGATGCT GGCTCAGCTG GGCGACCCTT ACACCCGGCT GCTTCGTCCA
GCGGACTACA CGGCGCTGAA AAACAGCACC AACGGCAGCC TCAGCGGTGT GGGCTTGCAA
CTCGGGCCCG ATGAGAGCAG CAATGGCATT GTGGTGATTT CGGCCCTCGA GGGTTCACCC
GCCGGCGAGG CAGAGATCAC CAGTGGCACG CAGTTGCTAT CTGTTGATGG CCGACCCGTG
GTGGATCTGG GACTTGAGGG AACCGTTGCA GCACTTCGGG GAGACGTGGG ATCTCAGGTA
GTGCTGACGC TGGACAACGG CAGCGGAGAA ACAACTGAAC TGACCCTGGA ACGCCGCAGC
GTGGACCTCA GGCCGGTGCG AACCCGGCGC TTGCGCACCG GCAGTCACAC CCTTGGCTAT
CTGCGGATCA CCCAGTTCAG CGACGGAGTC CCCGAACAGG TGAAAGAAGC CCTCACAGAG
TTGCAAAACA AAGAGATCGA AGGATTGGTG CTCGACCTCC GCAACAACTC AGGCGGATTG
GTGAGCGCTG GATTAGCAGT CGCAGACGAC TTCCTTTCCG GTGACGCCAT CGTTGAAACC
CGCAACCGCG ATGGCATTAA TGACACCATC CAGGCCAGTC TCCAGACGGT GTACGACGGA
CCGATGGTCA CCCTCGTGAA TGGAGGAACG GCCAGTGCGA GCGAAATCCT GGCTGGCGCC
CTTCAGGACA ACGAACGCGC CACCCTGCTC GGAGGCCAGA CCTTTGGCAA AGGGCTGATT
CAAACGCTGA CCAACCTCAG TGACGGCAGC GGCCTCGCCG TGACCGTCGC CGGCTACGTG
ACGCCGAGTG GACGAGATAT TCAAGGAGAA GGCATCGCAC CGGATCGTGG GTTGTCAGAT
CCGGAACCCC TGAATCCCGG CGGTGACGGT GATCGCTGGC TCTCGGAAGC CGAACAATGG
ATGGAGGCCC TGCTGGAACA ACCCGCTGAC GACACCGAGG CATGA
|
|---|
| Protein sequence | MVLGSACTAV ALSDTQQLVV DSWRLVNQGF WNPEQLDAVR WRRQRQKAME RSIESSDDAY
AAIESMLAQL GDPYTRLLRP ADYTALKNST NGSLSGVGLQ LGPDESSNGI VVISALEGSP
AGEAEITSGT QLLSVDGRPV VDLGLEGTVA ALRGDVGSQV VLTLDNGSGE TTELTLERRS
VDLRPVRTRR LRTGSHTLGY LRITQFSDGV PEQVKEALTE LQNKEIEGLV LDLRNNSGGL
VSAGLAVADD FLSGDAIVET RNRDGINDTI QASLQTVYDG PMVTLVNGGT ASASEILAGA
LQDNERATLL GGQTFGKGLI QTLTNLSDGS GLAVTVAGYV TPSGRDIQGE GIAPDRGLSD
PEPLNPGGDG DRWLSEAEQW MEALLEQPAD DTEA
|
|---|
| |