Gene Syncc9605_0476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0476 
Symbol 
ID3737679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp463950 
End bp464855 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content63% 
IMG OID637775066 
ProductHemK family modification methylase 
Protein accessionYP_380805 
Protein GI78212026 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.540191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGCAAG CCTCGGCCTT GAGAGACTGC ACAACCGTTG CCGGCACTGA TGTGTTGCAT 
TGGCGGCGCC AACAACTCGC CCGGGGTGGC ACCGCGGCTG ATCTGGATTG GTTGCTTGAT
CTGGCTGGTG GTCTTCGTTG GGCCAGCCTC AAACGGCTGT TGCTGGACCC GACGCGCAGC
GTCGACTTGG AGCAGTCCCT TGAGATGCTC TCTGGGCTGT GGGAGCGTCA CCTTCACGGG
AATGTTCCCC TCCAGCACCT GGTGGGGCTC TGTCCCTGGC GGGATGTGCT GCTTGAGTCG
TCGCCTGCCG CATTGATTCC CCGTCAGGAA ACAGAACTGC TGGTGGATCT AGCCCTGAGC
CAGTTCAAAG CCACCCCTCC CGCCCGTTGG GCTGACCTCG GCACTGGCTC AGGGGCCATC
GCTGTGGCTC TGGCCCGTGC CTGGCCGACG GCACCAGGGC ATGGCGTCGA CCTCAGTTCC
GATGCCTTGC AGTTGGCAGA ACGCAACCTT GAGCGTTGCG CCCCGCATCA CAGTTGTTCG
CTGCACCTCG GTTCGTGGTG GTCGCCCCTG AAGAGTTGGT GGGGAAGCCT CGATTTGGTG
GTCAGCAATC CTCCGTACAT CCCCGGTGCT GTGGTTGACG GTCTTGAGGC TGTGGTCCGT
GACCACGAAC CTCACTTGGC ATTGCTCGGG GGAGCGGATG GTTTGGACGC GATTCGGGCT
GTGGTGGATG GAGCACCAAC GGGGTTGTCG CCCGGAGGCT GGCTTCTGCT TGAACACCAT
CACGATCAGA GCGCTCAGGT GATGCAGCTG CTGCGGGATG CCGGCTTGGT GGAGGGCAGA
GCGGCCGCTG ATCTTGAGGG GACCCTTCGC TTCGCGCTTG CTCGTAAACC TGCCGAATCA
AGCTGA
 
Protein sequence
MAQASALRDC TTVAGTDVLH WRRQQLARGG TAADLDWLLD LAGGLRWASL KRLLLDPTRS 
VDLEQSLEML SGLWERHLHG NVPLQHLVGL CPWRDVLLES SPAALIPRQE TELLVDLALS
QFKATPPARW ADLGTGSGAI AVALARAWPT APGHGVDLSS DALQLAERNL ERCAPHHSCS
LHLGSWWSPL KSWWGSLDLV VSNPPYIPGA VVDGLEAVVR DHEPHLALLG GADGLDAIRA
VVDGAPTGLS PGGWLLLEHH HDQSAQVMQL LRDAGLVEGR AAADLEGTLR FALARKPAES
S