Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0468 |
Symbol | |
ID | 3737671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 457064 |
End bp | 458224 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637775057 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_380797 |
Protein GI | 78212018 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTC GGCGGGCGTT CCATGCGATT TTTTCGAACT ACCCACCTGA GGTAGACCGC CAGCCCCCCA TGTCTGCGAC TCCGACAGAA GAACAGATCC AGCATCAGGT TCAGGACGCG AACGCCACAG AAGCCTCTGC AGAAACCGTC GCCGCCGATC AGGCGTTTGA GGGTGAGGAT CTGACCATTC CTGAAGACGT CCCCACCGCG GATGATCCAA GCAGCCGCGC CGCCAGCCGC AGCCTGGACG ATGCCGGATT CACCATCGAT GAGTTCGCGG CTCTCCTCAG CAAGTACGAC TACAACTTCA AGCCTGGCGA CATCGTCAAC GGCACGGTCT TCGCCCTGGA ATCGAAGGGC GCCATGATCG ACATCGGCGC CAAGACGGCT GCCTTCATGC CTCTGCAAGA GGTGTCAATC AACCGGGTCG AGGGTCTGAG CGACGTGCTC CAGCCCGGAG AGATCCGCGA GTTCTTCATC ATGAGTGAGG AGAACGAAGA TGGTCAGCTG GCGCTGTCGA TCCGTCGGAT TGAATACCAG CGGGCTTGGG AGCGGGTCCG CCAGCTCCAG AAGGAAGACG CCACCATCTA CTCCGAAGTG TTTGCTACCA ACCGTGGTGG TGCCTTGGTG CGCGTTGAAG GTCTGCGGGG CTTCATCCCC GGATCCCACA TCAGCACCCG CAAGCCGAAG GAAGAACTGG TTGCCGACTT CCTGCCTCTG AAGTTCCTCG AGGTGGACGA GGAGCGCAAC CGCCTGGTGC TCAGCCACCG CCGCGCCCTG GTGGAGCGGA AGATGAATCG CCTGGAAGTG GGCGAAGTTG TGGTGGGTAC CGTCCGCGGC ATCAAGCCCT ACGGCGCCTT CATCGACATC GGTGGTGTCA GCGGTCTGCT GCACATTTCC GAGATCAGCC ACGAGCACAT CGAGACCCCC CACTCGGTGT TGAACGTGAA TGATCAAATG AAGGTGATGA TCATCGATCT GGATGCCGAG CGCGGCCGGA TTTCGTTGTC CACGAAGGCT CTCGAGCCCG AACCCGGCGA CATGCTCACC GACCCCCAGA AGGTGTTCGA GAAGGCCGAG GAAATGGCTG CTCGTTACAA GCAGATGCTG ATGGAGCAGG CCGAAGAGGG CGAAGATCCG ATCAGCTCCA TGATGATCTG A
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Protein sequence | MKRRRAFHAI FSNYPPEVDR QPPMSATPTE EQIQHQVQDA NATEASAETV AADQAFEGED LTIPEDVPTA DDPSSRAASR SLDDAGFTID EFAALLSKYD YNFKPGDIVN GTVFALESKG AMIDIGAKTA AFMPLQEVSI NRVEGLSDVL QPGEIREFFI MSEENEDGQL ALSIRRIEYQ RAWERVRQLQ KEDATIYSEV FATNRGGALV RVEGLRGFIP GSHISTRKPK EELVADFLPL KFLEVDEERN RLVLSHRRAL VERKMNRLEV GEVVVGTVRG IKPYGAFIDI GGVSGLLHIS EISHEHIETP HSVLNVNDQM KVMIIDLDAE RGRISLSTKA LEPEPGDMLT DPQKVFEKAE EMAARYKQML MEQAEEGEDP ISSMMI
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