Gene Syncc9605_0468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0468 
Symbol 
ID3737671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp457064 
End bp458224 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content60% 
IMG OID637775057 
Product30S ribosomal protein S1 
Protein accessionYP_380797 
Protein GI78212018 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTC GGCGGGCGTT CCATGCGATT TTTTCGAACT ACCCACCTGA GGTAGACCGC 
CAGCCCCCCA TGTCTGCGAC TCCGACAGAA GAACAGATCC AGCATCAGGT TCAGGACGCG
AACGCCACAG AAGCCTCTGC AGAAACCGTC GCCGCCGATC AGGCGTTTGA GGGTGAGGAT
CTGACCATTC CTGAAGACGT CCCCACCGCG GATGATCCAA GCAGCCGCGC CGCCAGCCGC
AGCCTGGACG ATGCCGGATT CACCATCGAT GAGTTCGCGG CTCTCCTCAG CAAGTACGAC
TACAACTTCA AGCCTGGCGA CATCGTCAAC GGCACGGTCT TCGCCCTGGA ATCGAAGGGC
GCCATGATCG ACATCGGCGC CAAGACGGCT GCCTTCATGC CTCTGCAAGA GGTGTCAATC
AACCGGGTCG AGGGTCTGAG CGACGTGCTC CAGCCCGGAG AGATCCGCGA GTTCTTCATC
ATGAGTGAGG AGAACGAAGA TGGTCAGCTG GCGCTGTCGA TCCGTCGGAT TGAATACCAG
CGGGCTTGGG AGCGGGTCCG CCAGCTCCAG AAGGAAGACG CCACCATCTA CTCCGAAGTG
TTTGCTACCA ACCGTGGTGG TGCCTTGGTG CGCGTTGAAG GTCTGCGGGG CTTCATCCCC
GGATCCCACA TCAGCACCCG CAAGCCGAAG GAAGAACTGG TTGCCGACTT CCTGCCTCTG
AAGTTCCTCG AGGTGGACGA GGAGCGCAAC CGCCTGGTGC TCAGCCACCG CCGCGCCCTG
GTGGAGCGGA AGATGAATCG CCTGGAAGTG GGCGAAGTTG TGGTGGGTAC CGTCCGCGGC
ATCAAGCCCT ACGGCGCCTT CATCGACATC GGTGGTGTCA GCGGTCTGCT GCACATTTCC
GAGATCAGCC ACGAGCACAT CGAGACCCCC CACTCGGTGT TGAACGTGAA TGATCAAATG
AAGGTGATGA TCATCGATCT GGATGCCGAG CGCGGCCGGA TTTCGTTGTC CACGAAGGCT
CTCGAGCCCG AACCCGGCGA CATGCTCACC GACCCCCAGA AGGTGTTCGA GAAGGCCGAG
GAAATGGCTG CTCGTTACAA GCAGATGCTG ATGGAGCAGG CCGAAGAGGG CGAAGATCCG
ATCAGCTCCA TGATGATCTG A
 
Protein sequence
MKRRRAFHAI FSNYPPEVDR QPPMSATPTE EQIQHQVQDA NATEASAETV AADQAFEGED 
LTIPEDVPTA DDPSSRAASR SLDDAGFTID EFAALLSKYD YNFKPGDIVN GTVFALESKG
AMIDIGAKTA AFMPLQEVSI NRVEGLSDVL QPGEIREFFI MSEENEDGQL ALSIRRIEYQ
RAWERVRQLQ KEDATIYSEV FATNRGGALV RVEGLRGFIP GSHISTRKPK EELVADFLPL
KFLEVDEERN RLVLSHRRAL VERKMNRLEV GEVVVGTVRG IKPYGAFIDI GGVSGLLHIS
EISHEHIETP HSVLNVNDQM KVMIIDLDAE RGRISLSTKA LEPEPGDMLT DPQKVFEKAE
EMAARYKQML MEQAEEGEDP ISSMMI