Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0467 |
Symbol | |
ID | 3737670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 456285 |
End bp | 457058 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637775056 |
Product | HAD family hydrolase |
Protein accession | YP_380796 |
Protein GI | 78212017 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCAAC TGCTGCTGAA GGGACATCCC ATCGGCAATT TCCAAGGGGT GCTGTTCGAT AAGGACGGCA CCCTTTCCCA TAGCGAGCCG CATCTGCTGG TCTTGGCAGA CGCACGCATC AACAAAGCCG TCAAGGTTGC TCAGGAAAAA GCCCATGCGC TGAAACCCTC TGAGCTGCGC CACACCCTGC GCAGAGCGTT CGGTGTTGAT CAAGGCATGC TCGATCCCGG CGGAACCCTG GCGGTTGCCT CCAGGCAGGA CAACATCGCC TCGACGGCAA CGGTGTTCTG CCTGTTGGGC TGCTCATGGC CCCAGGCTCT CTCCCTGGCC CAGACGTGCT TCGACGCGGT TGACCAGGAC GGCCTGATCG ACACCACCCC AAGCCCATTG ATCAACGGGG CTGGGCAACT CTTGCGGAAC CTGCACCAGC AGGGCGTCAC CGCTGCTGTG ATCAGCAACG ACACCCATTC CGGCATTGAA GACTTCCTGG CTCACCATCA GCTCAGCGCA GGCGTTGCCG GCATCTGGAG TGCTGACGAC CATCCGCGCA AACCCGATCC ACAGGCCGTC CTGGAACTGT GCAAGAGGCT TGGCCTACCA CCCCACCGGT GTGCCTTGGT TGGCGATGCG GAGACCGACC TTCAGATGGC CCTTGAGGCC GGTATCGGCG GCGTGATCGG CTTCACCGGT GGCTGGAAGC GTGCTCCGGA ACTGCCATCA GCACAGCATC TGCTCCACAG TTGGACCGAC CTCGCCCTCA GCACAGACGC GTAA
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Protein sequence | MAQLLLKGHP IGNFQGVLFD KDGTLSHSEP HLLVLADARI NKAVKVAQEK AHALKPSELR HTLRRAFGVD QGMLDPGGTL AVASRQDNIA STATVFCLLG CSWPQALSLA QTCFDAVDQD GLIDTTPSPL INGAGQLLRN LHQQGVTAAV ISNDTHSGIE DFLAHHQLSA GVAGIWSADD HPRKPDPQAV LELCKRLGLP PHRCALVGDA ETDLQMALEA GIGGVIGFTG GWKRAPELPS AQHLLHSWTD LALSTDA
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