Gene Syncc9605_0467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0467 
Symbol 
ID3737670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp456285 
End bp457058 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content62% 
IMG OID637775056 
ProductHAD family hydrolase 
Protein accessionYP_380796 
Protein GI78212017 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAAC TGCTGCTGAA GGGACATCCC ATCGGCAATT TCCAAGGGGT GCTGTTCGAT 
AAGGACGGCA CCCTTTCCCA TAGCGAGCCG CATCTGCTGG TCTTGGCAGA CGCACGCATC
AACAAAGCCG TCAAGGTTGC TCAGGAAAAA GCCCATGCGC TGAAACCCTC TGAGCTGCGC
CACACCCTGC GCAGAGCGTT CGGTGTTGAT CAAGGCATGC TCGATCCCGG CGGAACCCTG
GCGGTTGCCT CCAGGCAGGA CAACATCGCC TCGACGGCAA CGGTGTTCTG CCTGTTGGGC
TGCTCATGGC CCCAGGCTCT CTCCCTGGCC CAGACGTGCT TCGACGCGGT TGACCAGGAC
GGCCTGATCG ACACCACCCC AAGCCCATTG ATCAACGGGG CTGGGCAACT CTTGCGGAAC
CTGCACCAGC AGGGCGTCAC CGCTGCTGTG ATCAGCAACG ACACCCATTC CGGCATTGAA
GACTTCCTGG CTCACCATCA GCTCAGCGCA GGCGTTGCCG GCATCTGGAG TGCTGACGAC
CATCCGCGCA AACCCGATCC ACAGGCCGTC CTGGAACTGT GCAAGAGGCT TGGCCTACCA
CCCCACCGGT GTGCCTTGGT TGGCGATGCG GAGACCGACC TTCAGATGGC CCTTGAGGCC
GGTATCGGCG GCGTGATCGG CTTCACCGGT GGCTGGAAGC GTGCTCCGGA ACTGCCATCA
GCACAGCATC TGCTCCACAG TTGGACCGAC CTCGCCCTCA GCACAGACGC GTAA
 
Protein sequence
MAQLLLKGHP IGNFQGVLFD KDGTLSHSEP HLLVLADARI NKAVKVAQEK AHALKPSELR 
HTLRRAFGVD QGMLDPGGTL AVASRQDNIA STATVFCLLG CSWPQALSLA QTCFDAVDQD
GLIDTTPSPL INGAGQLLRN LHQQGVTAAV ISNDTHSGIE DFLAHHQLSA GVAGIWSADD
HPRKPDPQAV LELCKRLGLP PHRCALVGDA ETDLQMALEA GIGGVIGFTG GWKRAPELPS
AQHLLHSWTD LALSTDA