Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0442 |
Symbol | |
ID | 3735444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 435423 |
End bp | 436157 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637775032 |
Product | phycobilisome linker polypeptide |
Protein accession | YP_380773 |
Protein GI | 78211994 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.279269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.13238 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGGGC CAACAACTCT TTCCTCAGCT GCCAACGTCG ACACATCACA TGCTTCAGAT GTGGTACGCC AAGCGTACCG CCAGGTGTTT GGCAATCGAC ACCTGATGGA ACTCGATCTG AACCCTTCCA TTGAGGCACT GTTCATGAAC GGTGACCTAA CGGTTCAAGG ATTGGTAACT GCTCTCGCCC AGTCGGAAAC CTATAAAAAG CTTTTTCTGG AAAGCAACAG CCCCTACCGC TTTGTTGAAC TGAACTTCAA ACATCTACTA GGCCGTCCTC CCCGTGACCA AGCTGAGTTG ATGAGCCATG TTCGACTGCT GCAAGAAGAG GGATACGAAG CAGAAATCGC CAGTTACACC TACAGCGATG AATATCTTTC TGCCTTCGGC ATCGATCAAG TTCCATACAA TCGTGCCACG CAGACCGTGG TGGGCGGAAG CACGCTGTAC TTCACACGTG CGAAAGCTTT GGATGCCGGA TATGCCGGAT ACGACAACGC AGAAACAGAT TCGAAACTTT TGAGTAGTCT CTGCACTGAC AGTTCACCAG AGGCACAGGA TCGCAGAAGC GTAGGCAACG CCAAGGCGTT GACGATCAAC TGGACATCAC GTCGTCAGGT GGGTGCCAAC CGCCGAGCAG TCCAAAAATC GGTGGTGAAT CAAACCTCCA TGTCAGCCAC CATCAAATCA ATTCTGTCGC AGGGTGGGCA GATCCTTTCT ATTGCGAAGG CTTAA
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Protein sequence | MTGPTTLSSA ANVDTSHASD VVRQAYRQVF GNRHLMELDL NPSIEALFMN GDLTVQGLVT ALAQSETYKK LFLESNSPYR FVELNFKHLL GRPPRDQAEL MSHVRLLQEE GYEAEIASYT YSDEYLSAFG IDQVPYNRAT QTVVGGSTLY FTRAKALDAG YAGYDNAETD SKLLSSLCTD SSPEAQDRRS VGNAKALTIN WTSRRQVGAN RRAVQKSVVN QTSMSATIKS ILSQGGQILS IAKA
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