Gene Syncc9605_0442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0442 
Symbol 
ID3735444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp435423 
End bp436157 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content51% 
IMG OID637775032 
Productphycobilisome linker polypeptide 
Protein accessionYP_380773 
Protein GI78211994 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.279269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.13238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGGGC CAACAACTCT TTCCTCAGCT GCCAACGTCG ACACATCACA TGCTTCAGAT 
GTGGTACGCC AAGCGTACCG CCAGGTGTTT GGCAATCGAC ACCTGATGGA ACTCGATCTG
AACCCTTCCA TTGAGGCACT GTTCATGAAC GGTGACCTAA CGGTTCAAGG ATTGGTAACT
GCTCTCGCCC AGTCGGAAAC CTATAAAAAG CTTTTTCTGG AAAGCAACAG CCCCTACCGC
TTTGTTGAAC TGAACTTCAA ACATCTACTA GGCCGTCCTC CCCGTGACCA AGCTGAGTTG
ATGAGCCATG TTCGACTGCT GCAAGAAGAG GGATACGAAG CAGAAATCGC CAGTTACACC
TACAGCGATG AATATCTTTC TGCCTTCGGC ATCGATCAAG TTCCATACAA TCGTGCCACG
CAGACCGTGG TGGGCGGAAG CACGCTGTAC TTCACACGTG CGAAAGCTTT GGATGCCGGA
TATGCCGGAT ACGACAACGC AGAAACAGAT TCGAAACTTT TGAGTAGTCT CTGCACTGAC
AGTTCACCAG AGGCACAGGA TCGCAGAAGC GTAGGCAACG CCAAGGCGTT GACGATCAAC
TGGACATCAC GTCGTCAGGT GGGTGCCAAC CGCCGAGCAG TCCAAAAATC GGTGGTGAAT
CAAACCTCCA TGTCAGCCAC CATCAAATCA ATTCTGTCGC AGGGTGGGCA GATCCTTTCT
ATTGCGAAGG CTTAA
 
Protein sequence
MTGPTTLSSA ANVDTSHASD VVRQAYRQVF GNRHLMELDL NPSIEALFMN GDLTVQGLVT 
ALAQSETYKK LFLESNSPYR FVELNFKHLL GRPPRDQAEL MSHVRLLQEE GYEAEIASYT
YSDEYLSAFG IDQVPYNRAT QTVVGGSTLY FTRAKALDAG YAGYDNAETD SKLLSSLCTD
SSPEAQDRRS VGNAKALTIN WTSRRQVGAN RRAVQKSVVN QTSMSATIKS ILSQGGQILS
IAKA