Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0433 |
Symbol | |
ID | 3735435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 428840 |
End bp | 429706 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637775023 |
Product | C-phycoerythrin class II gamma chain, linker polypeptide |
Protein accession | YP_380764 |
Protein GI | 78211985 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.591876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTAAGCA CACAAACCAG CCCCGCTGGA ATGGCTTCGG CGAGTCGCAC CAAGCCAGCC TCGTACGCCA TGCCAAGCAA AGCTGGCAAA AACACTGTTC ATCGGACAGT AGCTGGATCA ATCGCTGAAT TTAAGCGCAA CACTTGTTCT CAGATGGGGC TCGGAATTGG CCCAAGACTG CACAGCGAAT GTCCCTTCGG TGCAGTTTTT GATGAATATC ACCCCAGTGA TTCCTGGGCT TTGGAAAGAA CCATTAATGA CGCGTATAGA CAGGTCTACG GAAACCTGCC TCCCACTGAA AACGAGCGGT ACACCTCCCT TGAAGCACGC TTGATGAACG GGGAAATTAC GGTCCGCGAC TTTGTCAACG GGTTGGCAAA ATCTCCTTTC TATAAGGATA ATTACTTCCA CAGTGTTGCC CCACAACGTG GGATCGAGCT TAATTTCAAA CACCTCTTAG GGAGAGCACC TCTCAATCAA GAAGAAGTTC AAAACAGTAT CAAGCTTCAA GCAGAAGAGG GTTTTGATGC TCTGATCGAT AGCCTCACAG ATTGCGCAGA ATATGCAGAG GTTTTTGGAT CGGACATCGT TCCCTATATG CGGGCGGGAG ATTCCTACGC GGGAATGATG ACCAGCTCCT TCAACATGAT GAGAGAGCTT GCTGGCACAA AGGTTGCCGT CAGCGACAAT GCACAAGGAA GTCGCAGTCG CACCAACACA CAGCTGGCTG CGGCATCGAT CAGCATGATG AAGCCGATCT TTAAGGGCGC ACCAACTCTG CCCCAACAAA AGTATGGTGC ACAACAGCCT CCCAAAAGGA CAGGAGCTGT TCCGTTCCGA CCGTTCGGAG TTAAACCGTT TGCCTGA
|
Protein sequence | MLSTQTSPAG MASASRTKPA SYAMPSKAGK NTVHRTVAGS IAEFKRNTCS QMGLGIGPRL HSECPFGAVF DEYHPSDSWA LERTINDAYR QVYGNLPPTE NERYTSLEAR LMNGEITVRD FVNGLAKSPF YKDNYFHSVA PQRGIELNFK HLLGRAPLNQ EEVQNSIKLQ AEEGFDALID SLTDCAEYAE VFGSDIVPYM RAGDSYAGMM TSSFNMMREL AGTKVAVSDN AQGSRSRTNT QLAAASISMM KPIFKGAPTL PQQKYGAQQP PKRTGAVPFR PFGVKPFA
|
| |