Gene Syncc9605_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0417 
Symbol 
ID3736514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp416554 
End bp417030 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content61% 
IMG OID637775007 
Productprotein tyrosine phosphatase 
Protein accessionYP_380748 
Protein GI78211969 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0349216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0689798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAG TATTATTCGT CTGCCTCGGC AACATCTGCC GCTCACCAGC AGCCGAAGGC 
GTCTTCCTAC ATCTGCTCGA AGAACGCGGT CTCAGTGATC AGTTCGTGGT GGATTCCGCA
GGAACGGGCG GATGGCATGT GGGCAATCCG GCGGACCGAC GCATGCAGGC TGCTGCCAAC
CGCCGCGGCA TCAACCTCCC CAGCCGCGCT CGACAGATCA GCCTCGACGA TTTCTCGAGT
TTCGATCTGG TGCTCACCAT GGACGACGAC AATCTCACGG CCGTCCAGGG ACTGGCTCGC
GAAGCTGGGC CTCGAGCAAC GGCCAGCATC AAGCCCATGC TCAGCTATGC CCGGGGATTC
TCCGAAACGG AGGTGCCTGA TCCTTACTAC GGGGGCGAGG CGGGTTTCGA GCATGTGCTC
GATCTGCTCG AGGATGCCTG CGCCAACCTG CTCGACGAGC TCAGCCCGCT GGCGTAG
 
Protein sequence
MIKVLFVCLG NICRSPAAEG VFLHLLEERG LSDQFVVDSA GTGGWHVGNP ADRRMQAAAN 
RRGINLPSRA RQISLDDFSS FDLVLTMDDD NLTAVQGLAR EAGPRATASI KPMLSYARGF
SETEVPDPYY GGEAGFEHVL DLLEDACANL LDELSPLA