Gene Syncc9605_0409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0409 
Symbol 
ID3736731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp409394 
End bp410581 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content65% 
IMG OID637774998 
Producthypothetical protein 
Protein accessionYP_380740 
Protein GI78211961 
COG category[S] Function unknown 
COG ID[COG4370] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03492] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.321812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCC TGCGGATCAT CCAGGCCGTG CATCGGCGCG CACCGCGACG CCCCCTGACC 
GTGCTCCCTT TGGTGGGCGC CGGCCGGGTC TTTGATTCTG CGGTTCAGCA GGGATGGTTG
ACATGCCTGG GGCCGAAAGC GGCCCTGCCC AGCGGTGGCT TCAGCAACCA AAGCCTGAGA
GGTCTGCTGG CAGACGTCAG GGCTGGACTC CCCAGTCTGA GTTGGAGTCA ATGGCGCTTG
GTGTGCCGCC TGGGCCATGA GCGCCAACCC ATCGTTGCCG TTGGCGATTT ACTGCCACTG
CTGATGGCCT GGAGCAGTGG CGCTCCCTTC GGCTTCATCG GCACTCCCAA AAGCGACTAC
ACCTGGCTCA GTGGTCCTGG AGGGGCCAAA AGCGACTGCT ACCACCGGCT CAAGGGCAGT
GAGTGGGATC CCTGGGAATG GCGCCTGATG CGCTCACGCC GCTGTCAACT GGTGGCCATG
CGTGATCGGC TCACAGCCCG TGGCTTGCAG CGCAAGGGCG TGGGCGCCCT TGCACCGGGA
AATCCGATGA TGGATGGGCT CCAGATCCAA CCGCTGCCAT CGGCCCTGGA ACGCTGCCGC
CGAGTGCTCC TGCTCTGCGG AAGTCGCATG CCGGAGGCCC AGCGAAACCT GCAGCGGTTG
GTTCGCAGTG CCATGGCGCT GACCGGCCGT GTGCCGATGG CACTGCTCGT GGCCGTGGGC
GCCCAACCCG ATGCAGAGGT TCTGAGCGAC AGTCTTGAGC AACTGGGGTT TCGACGCAGC
CTTCCGCCTT CGGACCTACT GGGTGCCGAA GCCTGCTGGG TGAAAGGAGC CTGTCTGGTC
CTGATCGGGC GAGGTTGCTT TGACCAATGG GCCGGCTGGG CAGAAGCCGG CATCGCCAAC
GCCGGAACGG CGACGGAACA ACTGGTTGGG CTGGGCATTC CGGCCTTGTC CCTGCCTGGA
CCAGGACCGC AGTTCAAGCC AGGCTTCGCC CGCCGTCAGA GCCGCCTGTT GGGGGGAGCG
GTTCGTCCCT GCTCTGATGA ATCCGAGCTC ACTAGACGGC TCGAAGTGCT TCTGGCTGAA
CCGGAACTCC GCTCCCATCT GGGACGGATC GGGTCGCAGC GGATGGGGCC AGCAGGGGGG
AGCGATCAGC TGGCACGCCT GATCCTGGAT CGCTTCAACG GATACTGA
 
Protein sequence
MITLRIIQAV HRRAPRRPLT VLPLVGAGRV FDSAVQQGWL TCLGPKAALP SGGFSNQSLR 
GLLADVRAGL PSLSWSQWRL VCRLGHERQP IVAVGDLLPL LMAWSSGAPF GFIGTPKSDY
TWLSGPGGAK SDCYHRLKGS EWDPWEWRLM RSRRCQLVAM RDRLTARGLQ RKGVGALAPG
NPMMDGLQIQ PLPSALERCR RVLLLCGSRM PEAQRNLQRL VRSAMALTGR VPMALLVAVG
AQPDAEVLSD SLEQLGFRRS LPPSDLLGAE ACWVKGACLV LIGRGCFDQW AGWAEAGIAN
AGTATEQLVG LGIPALSLPG PGPQFKPGFA RRQSRLLGGA VRPCSDESEL TRRLEVLLAE
PELRSHLGRI GSQRMGPAGG SDQLARLILD RFNGY