Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0375 |
Symbol | rplD |
ID | 3736562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 376554 |
End bp | 377189 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637774962 |
Product | 50S ribosomal protein L4 |
Protein accession | YP_380706 |
Protein GI | 78211927 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGTT GTGTCGTTCG TGATTGGCAG GGCAAGGAAG CCGGCAAGGC AACCCTGGAC CTGAAGGTGG CCAAAGAGAC CACCGCCGTT GATCTCATGC ATCGGGCTGT TCTGCGTCAG CAGGCCCATG CACGCCAAGG AACCGCCAGC ACCCTCACCC GCTCGGAAGT GCGCGGTGGT GGTCGCAAGC CCTACAAGCA GAAAGGAACG GGTCGGGCCC GTCAGGGATC CATCCGGACT CCCCTGAAAC CTGGCGGCGG CATCATCTTT GGACCCAAGC CCCGCACGTA CAACCTTGCG ATGAACCGCA AGGAGCGTCG TCTGGCCCTG CGCACTGCGT TGATGGCCCG CATCGACGAC GTCACCGTCG TGCAGGACTT CGGTGCTTCG CTGGAGGCCC CCAAGACCCG TGAGATCACG GATGCTCTGG GACGCCTCGG TGTTGCTGCC GGCTCCAAGG TGCTCATCGT TCTGACGAAC CCCTCCGATG TTGTTCGCCG TTCCGTGCGC AACCTGGAGA AAGTCAAGTT GATCTCCGCA GATCAGCTGA ACGTCTTCGA CCTGCTCCAC GCCAATGCTC TGGTGCTGGG CGAGGAAGCT CTCGCAACCA TCCAGGAGGT CTACGGCGAT GACTGA
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Protein sequence | MASCVVRDWQ GKEAGKATLD LKVAKETTAV DLMHRAVLRQ QAHARQGTAS TLTRSEVRGG GRKPYKQKGT GRARQGSIRT PLKPGGGIIF GPKPRTYNLA MNRKERRLAL RTALMARIDD VTVVQDFGAS LEAPKTREIT DALGRLGVAA GSKVLIVLTN PSDVVRRSVR NLEKVKLISA DQLNVFDLLH ANALVLGEEA LATIQEVYGD D
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