Gene Syncc9605_0375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0375 
SymbolrplD 
ID3736562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp376554 
End bp377189 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content62% 
IMG OID637774962 
Product50S ribosomal protein L4 
Protein accessionYP_380706 
Protein GI78211927 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGTT GTGTCGTTCG TGATTGGCAG GGCAAGGAAG CCGGCAAGGC AACCCTGGAC 
CTGAAGGTGG CCAAAGAGAC CACCGCCGTT GATCTCATGC ATCGGGCTGT TCTGCGTCAG
CAGGCCCATG CACGCCAAGG AACCGCCAGC ACCCTCACCC GCTCGGAAGT GCGCGGTGGT
GGTCGCAAGC CCTACAAGCA GAAAGGAACG GGTCGGGCCC GTCAGGGATC CATCCGGACT
CCCCTGAAAC CTGGCGGCGG CATCATCTTT GGACCCAAGC CCCGCACGTA CAACCTTGCG
ATGAACCGCA AGGAGCGTCG TCTGGCCCTG CGCACTGCGT TGATGGCCCG CATCGACGAC
GTCACCGTCG TGCAGGACTT CGGTGCTTCG CTGGAGGCCC CCAAGACCCG TGAGATCACG
GATGCTCTGG GACGCCTCGG TGTTGCTGCC GGCTCCAAGG TGCTCATCGT TCTGACGAAC
CCCTCCGATG TTGTTCGCCG TTCCGTGCGC AACCTGGAGA AAGTCAAGTT GATCTCCGCA
GATCAGCTGA ACGTCTTCGA CCTGCTCCAC GCCAATGCTC TGGTGCTGGG CGAGGAAGCT
CTCGCAACCA TCCAGGAGGT CTACGGCGAT GACTGA
 
Protein sequence
MASCVVRDWQ GKEAGKATLD LKVAKETTAV DLMHRAVLRQ QAHARQGTAS TLTRSEVRGG 
GRKPYKQKGT GRARQGSIRT PLKPGGGIIF GPKPRTYNLA MNRKERRLAL RTALMARIDD
VTVVQDFGAS LEAPKTREIT DALGRLGVAA GSKVLIVLTN PSDVVRRSVR NLEKVKLISA
DQLNVFDLLH ANALVLGEEA LATIQEVYGD D