Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0364 |
Symbol | rplE |
ID | 3735247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 371631 |
End bp | 372170 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637774951 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_380695 |
Protein GI | 78211916 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.731196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACTCA AGAAGCGCTA TCGGGAGACC ATCCAGCCCA AGCTGCAGAA GGATCTCTCC CTCACCAACA TCCACGAAGT CCCCAAGGTG TTGAAAGTCA CCGTCAACCG GGGTCTCGGC GAAGCCGCCG CCAATGCCAA GTCCCTCGAG GCTTCGGTGA ATGAGCTGGC GCAGATCACC GGCCAGAAGG TCGTTGTGAC CCGCGCCAAA AAAGCCATCG CCGGCTTCAA GATTCGGCAG GGCATGCCGA TCGGCTGTGC GGTCACCCTC CGTGGTGATC GGATGTATGC CTTCCTGGAG CGCCTGATCA ACCTGGCGCT ACCCCGCATC CGCGACTTCC GCGGGGTCAG CCCCAAGAGT TTCGATGGCC GCGGCAATTA CACCCTTGGG GTGCGCGAAC AGATCATTTT CCCTGAGATC TCCTTCGACA AGATCGATGC GATCCGGGGC ATGGACATCA CCATCGTGAC CACTGCCCGT TCGGACGAAG AGGGCCGGGC CCTCCTCCGC GAGATGGGAA TGCCGTTCCA GAGCAACTGA
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Protein sequence | MSLKKRYRET IQPKLQKDLS LTNIHEVPKV LKVTVNRGLG EAAANAKSLE ASVNELAQIT GQKVVVTRAK KAIAGFKIRQ GMPIGCAVTL RGDRMYAFLE RLINLALPRI RDFRGVSPKS FDGRGNYTLG VREQIIFPEI SFDKIDAIRG MDITIVTTAR SDEEGRALLR EMGMPFQSN
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