| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0353 |
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| Symbol | |
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| ID | 3736845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 365087 |
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| End bp | 366025 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637774940 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_380684 |
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| Protein GI | 78211905 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.902016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGCAGT ACCAGATTGA TCGCATTGAG CATCAGGTGG CCGACGATCG CGCCCAGTCC
GGCGTTTTCC TGATCGGCCC CCTCGAGCGT GGCCAGGCCA CGACCCTGGG CAACGCGCTG
CGCCGCGTGC TGATGGGTGG GCTGGAAGGC AGTGCTGTTA CCGCCATCCG CATTGCCGGT
GTCAATCACG AATACGCCAC GGTTCCTGGG GTCCGTGAGG ACGTTCTCGA CATCCTGCTG
AACTGCAAGG AGCTCACCGT CAACAGCCGT TCGGCCGAAC TCGAGATCGG CCGTCTCGTG
GTTGCTGGTC CCGCTGAGGT GAAGGCCGGA GATCTTCAGT TCTCCTCCCA GGTGCAGGTG
GTGGACACCG ATCGTCCGAT TGCCACCGTG GCTGACGGCC ACAGCCTCGA GCTGGAGCTT
CACGTTGAGC GCGGCGTCGG CTATCGCCCG GTTGATCGCC ACAACGAAGA AACCAGTGCC
ATCGATCTAC TCCAGATCGA TGCGGTGTTC ATGCCCGTGA CCCGGGTCAA CTTCACCATC
GACGAAACCG CTGTTGCCGA AGGCGGTTCG GCCCGCGAGC GCCTGCGGAT GGAGATCGTC
ACTGACGGCT CCATTACCCC CGACGAAGCC CTGGCTCAAT CAGCCAATCA ATTGATTGAG
CTTTTCCAGC CGCTGGCCAC GGTCACTCTC GTGGAGGAAG TTCCTGCTGA ACCCGAGCCC
TCGGCGGAAG CACAGATTCC TCTTGAGGAA CTGAACCTTT CGGTTCGCGC CTACAACTGC
CTCAAGCGGG CCCAGGTCAA CTCCGTTTCT GACCTGATGG GCTTCAGCTA CGAGGATCTT
CTGGAGATCA AGAACTTCGG TTCCAAATCT GCTGATGAAG TGATCGAAGC CCTCGAGCGC
ATCGGCATCT CCATCCCCCA GAGCCGCACT TCTGCATAA
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| Protein sequence | MLQYQIDRIE HQVADDRAQS GVFLIGPLER GQATTLGNAL RRVLMGGLEG SAVTAIRIAG
VNHEYATVPG VREDVLDILL NCKELTVNSR SAELEIGRLV VAGPAEVKAG DLQFSSQVQV
VDTDRPIATV ADGHSLELEL HVERGVGYRP VDRHNEETSA IDLLQIDAVF MPVTRVNFTI
DETAVAEGGS ARERLRMEIV TDGSITPDEA LAQSANQLIE LFQPLATVTL VEEVPAEPEP
SAEAQIPLEE LNLSVRAYNC LKRAQVNSVS DLMGFSYEDL LEIKNFGSKS ADEVIEALER
IGISIPQSRT SA
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