Gene Syncc9605_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0345 
Symbolalr 
ID3736837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp359693 
End bp360823 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content64% 
IMG OID637774932 
Productalanine racemase 
Protein accessionYP_380676 
Protein GI78211897 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.605258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.144303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCCGG AGCTGAATCC ACGTCAGCGC GCCTGGGTGG AGGTTTCACC TGCGGCGATT 
CGGGCCAATG CCAGGGCGCT GTGCCAGCAC CTAGGCCCTC GCACCCAACT GATGGCAGTG
GTGAAGGCCG ATGGCTACGG CCACGGTGCC GAAACGGTGG CAAGGGCGGC GCTTCAGGGT
GGAGCAACGA GCCTTGGCGT GGCCACGCTC CAGGAAGGTC TTGAACTGCG GCGGGCCGGT
CTGGAGGCAC CGGTGCTGTT GCTCAGCAAC CTCAATGAAC CGGACGACCT GCGCACCTGC
CTGCACTGGC GGTTGATGCC CACCCTGAGC AGCCTCAGGG ATGCCCAGCT CTGCAACGCT
TTGGCTGCCG ACAGCGGTCG ATGTTTCGAC GTGCAGCTGA AGATCGACAC CGGCATGGCA
CGGCTGGGCT GCTCCCTCAG CGAGGGACAT CAGACCGCGG CGGTGCTGCA GAGCCTGGAA
CACCTCAATC TGGAGGGCAT CTACAGCCAT CTGGCCTGTG CCGATGAGCC TGACGATGCC
TTGACAAGCC TCCAGCAGGA GCGCTTCGTG AGCATGCTCT CGGCCCTGCC CCGAGGCGGC
GCCGGCATCA CCCGCCATCT GGCCAACTCG GCAGGAACCT TGCTCAACCG GGAGCTGCAT
CACGACCTCG TTCGCGTTGG GTTGGCCCTG TACGGCCATG CCCCTGCAAG TCATTTGAAC
AACGTCATTC CCCTGCAACC CGCCCTGGCA GTTCGCGCCC GGGTCAGCCT GATCCGTGAC
GTTATCGCCG GCACAGGGGT CAGCTACGGC CATCGCTTCA TCACCCAGCG CCCCACTCGG
CTTGCCGTGG TGGGCATCGG CTATGCCGAT GGTGTTCTGC GGTCCCTCAG CGGGCACATT
CACGCCCTGC ATAGCAATCG CCAGCTGCCG CAGGTGGGAG CCATCACCAT GGACCAGCTC
CTGCTGGATG CCACCGATGC AGCTGGGCTG GAGCCAGGCG ACATCGTCAC TCTGCTTGGG
CAGGACGGTG ACCTGGAGTT AAGCCCTCAA AACTGGAGCG ACCACTGCGG CTCGATTCCC
TGGGAGATCC TCTGTGGTTT CAAACGACGC CTACCTCGAG TGGATGTATA A
 
Protein sequence
MIPELNPRQR AWVEVSPAAI RANARALCQH LGPRTQLMAV VKADGYGHGA ETVARAALQG 
GATSLGVATL QEGLELRRAG LEAPVLLLSN LNEPDDLRTC LHWRLMPTLS SLRDAQLCNA
LAADSGRCFD VQLKIDTGMA RLGCSLSEGH QTAAVLQSLE HLNLEGIYSH LACADEPDDA
LTSLQQERFV SMLSALPRGG AGITRHLANS AGTLLNRELH HDLVRVGLAL YGHAPASHLN
NVIPLQPALA VRARVSLIRD VIAGTGVSYG HRFITQRPTR LAVVGIGYAD GVLRSLSGHI
HALHSNRQLP QVGAITMDQL LLDATDAAGL EPGDIVTLLG QDGDLELSPQ NWSDHCGSIP
WEILCGFKRR LPRVDV