Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0345 |
Symbol | alr |
ID | 3736837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 359693 |
End bp | 360823 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637774932 |
Product | alanine racemase |
Protein accession | YP_380676 |
Protein GI | 78211897 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.605258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.144303 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATTCCGG AGCTGAATCC ACGTCAGCGC GCCTGGGTGG AGGTTTCACC TGCGGCGATT CGGGCCAATG CCAGGGCGCT GTGCCAGCAC CTAGGCCCTC GCACCCAACT GATGGCAGTG GTGAAGGCCG ATGGCTACGG CCACGGTGCC GAAACGGTGG CAAGGGCGGC GCTTCAGGGT GGAGCAACGA GCCTTGGCGT GGCCACGCTC CAGGAAGGTC TTGAACTGCG GCGGGCCGGT CTGGAGGCAC CGGTGCTGTT GCTCAGCAAC CTCAATGAAC CGGACGACCT GCGCACCTGC CTGCACTGGC GGTTGATGCC CACCCTGAGC AGCCTCAGGG ATGCCCAGCT CTGCAACGCT TTGGCTGCCG ACAGCGGTCG ATGTTTCGAC GTGCAGCTGA AGATCGACAC CGGCATGGCA CGGCTGGGCT GCTCCCTCAG CGAGGGACAT CAGACCGCGG CGGTGCTGCA GAGCCTGGAA CACCTCAATC TGGAGGGCAT CTACAGCCAT CTGGCCTGTG CCGATGAGCC TGACGATGCC TTGACAAGCC TCCAGCAGGA GCGCTTCGTG AGCATGCTCT CGGCCCTGCC CCGAGGCGGC GCCGGCATCA CCCGCCATCT GGCCAACTCG GCAGGAACCT TGCTCAACCG GGAGCTGCAT CACGACCTCG TTCGCGTTGG GTTGGCCCTG TACGGCCATG CCCCTGCAAG TCATTTGAAC AACGTCATTC CCCTGCAACC CGCCCTGGCA GTTCGCGCCC GGGTCAGCCT GATCCGTGAC GTTATCGCCG GCACAGGGGT CAGCTACGGC CATCGCTTCA TCACCCAGCG CCCCACTCGG CTTGCCGTGG TGGGCATCGG CTATGCCGAT GGTGTTCTGC GGTCCCTCAG CGGGCACATT CACGCCCTGC ATAGCAATCG CCAGCTGCCG CAGGTGGGAG CCATCACCAT GGACCAGCTC CTGCTGGATG CCACCGATGC AGCTGGGCTG GAGCCAGGCG ACATCGTCAC TCTGCTTGGG CAGGACGGTG ACCTGGAGTT AAGCCCTCAA AACTGGAGCG ACCACTGCGG CTCGATTCCC TGGGAGATCC TCTGTGGTTT CAAACGACGC CTACCTCGAG TGGATGTATA A
|
Protein sequence | MIPELNPRQR AWVEVSPAAI RANARALCQH LGPRTQLMAV VKADGYGHGA ETVARAALQG GATSLGVATL QEGLELRRAG LEAPVLLLSN LNEPDDLRTC LHWRLMPTLS SLRDAQLCNA LAADSGRCFD VQLKIDTGMA RLGCSLSEGH QTAAVLQSLE HLNLEGIYSH LACADEPDDA LTSLQQERFV SMLSALPRGG AGITRHLANS AGTLLNRELH HDLVRVGLAL YGHAPASHLN NVIPLQPALA VRARVSLIRD VIAGTGVSYG HRFITQRPTR LAVVGIGYAD GVLRSLSGHI HALHSNRQLP QVGAITMDQL LLDATDAAGL EPGDIVTLLG QDGDLELSPQ NWSDHCGSIP WEILCGFKRR LPRVDV
|
| |