Gene Syncc9605_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0339 
Symbol 
ID3736830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp352210 
End bp353172 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content61% 
IMG OID637774925 
Productglycosyl transferase family protein 
Protein accessionYP_380670 
Protein GI78211891 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0298954 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAC CCCTGAATCT CTCGGTGGTG GTGCCGCTGT ACAACGAAGA GGAAAGCCTG 
CCCCACCTGG TTGAGCAGCT CCTTTCAGCA CTGCGTCCAA CCGACGAGAC GTTTGAGCTG
GTCCTGGTCG ACGACGGATC CAGCGACCGT ACCGCCAAAG TGCTAGCCGA GGTCAGCGCA
GAGGTGCCCG AAGTGGTAGC TGTGCTGTTG CGCAAGAACT ATGGCCAGAC CGCAGCCATG
GCGGCTGGTT TTGATGTGGC TGGCGGAGAG GTCATCGTCA GCCTGGATGG GGATCTTCAG
AACGATCCAG CCGACATCCC CATGCTGCTG GCCAAGTTGC GTGAGGGGTA TGACCTCGTG
AGTGGCTGGC GCCATCAGCG CCAGGACGCC GCCCTCCAGC GCAAACTTCC CTCCCAGATC
GCCAACCGCT TAATCGGCCG GGTGACCGGT GTGCGGCTGC ATGACTACGG CTGCTCCCTC
AAGGCCTATC GACGGGAAGT GCTCTCAGAC ATGCGTCTCT ATGGCGAGCT GCATCGCTTT
CTTCCCGCCC TGGCCTTCAT CGAGGGTGCT CGGATCACCG AAGTGAAGGT GAACCACCAG
GCGCGTCAGT TCGGCAGCAG CAAGTACGGG ATCGATCGCA CGTTCCGTGT GCTGATGGAT
CTGCTCACCG TCTGGTTCAT GAAGCGTTTC CTGACCAGGC CGATGTACGT GTTCGGCTTC
GGAGGACTGC TGGCCATTGC TGCCAGCCTG GTGACCAGCA CCTATCTGTT CGTGATCAAG
GTGATGGGAG GCGACATTGC CAATCGCCCA CTGCTCACCC TGGCGGTGGT GCTTGGCCTG
GCGGGCATTC AACTGTTCTG CTTCGGCCTT CTCGGCGAAC TGCTGATCCG TACATACCAC
GAAAGCCAGG ACCGACCGAT CTATCGCATC CGCGAAACGT TGCGCGGCGG CCGCGCCGGC
TGA
 
Protein sequence
MSAPLNLSVV VPLYNEEESL PHLVEQLLSA LRPTDETFEL VLVDDGSSDR TAKVLAEVSA 
EVPEVVAVLL RKNYGQTAAM AAGFDVAGGE VIVSLDGDLQ NDPADIPMLL AKLREGYDLV
SGWRHQRQDA ALQRKLPSQI ANRLIGRVTG VRLHDYGCSL KAYRREVLSD MRLYGELHRF
LPALAFIEGA RITEVKVNHQ ARQFGSSKYG IDRTFRVLMD LLTVWFMKRF LTRPMYVFGF
GGLLAIAASL VTSTYLFVIK VMGGDIANRP LLTLAVVLGL AGIQLFCFGL LGELLIRTYH
ESQDRPIYRI RETLRGGRAG