Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0335 |
Symbol | |
ID | 3737415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 346703 |
End bp | 347827 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637774920 |
Product | hypothetical protein |
Protein accession | YP_380666 |
Protein GI | 78211887 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0122365 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGACC CACCTGCCAT GGCGAGAACT CGACGACTGA TCCTGCATGC AGGCACCCAT AAGACAGCAT CGTCAGACAT TCAGTGCCGG TTGCGCCGCA GTGCATCCCT TCTGGCGGAC CAGAAGATCA TTTACCAATT CCCCGACGAG GATCAGTGGG ATTTCAAACA GCTCGTGAAA GCCATGAGCA AGGAGCGATG GGGTCCATGG CATTCCTATC TCAAGCGTTG GAGCAAGACC GATGCAGACG TGTTGATCAG CGCCGAACAA TTTGGCCCGC AGCTCACATG CGTCGGGGCC GTAAGCGCCC TGCAGACAAT CGCCAGAGAG CATGGATTTA AGCTGACAAT TGTCATCTTT ATCCGCTCCC AGCTCGATTA CATCAATTCA CGATATGGAT ACAGTTTAAA ACGTTTTTAT CACAGCAAAA CCTTTGCCGA ATACGTCCAA GACGTCCTGG ACGGCGAACG AATGATCAAA GGAAAAGCAG TAGAAATAGA CAACAGACGA TCCGATATCT TTGATTTCTG GAACTACTTT TCTTCTCTTC TGAATGAGCG TAACTGCGGA CTCGATGTGC GTTTCATCCC GTTCCGACAA ACCCATCCAG ATCCATTCAT CCAGTTTCTA CACTCACTCG AACTTGACCC ATCTCTGCCC TGGGCAGAAC ACAGAGAGAG CAGCCTGAAT TCAGGAACAG GGCCGAGGGG AACCTGGCTG GCGAGGGAGC TTTCACAAAG GCTGCGACAT CACGGCATCT CCCCGAGAGC AATTTCAGGA TCAACAACAA TCATCCCCAA GGAAACCGCA TTTCGCGGTT GGGATGACGG CAAATTCTGG GGATTTAATG CGGCGCTAGC CCATCGCGTT CAGGACCATT TCAAAGCCAA CAACAATTTT TTTGCACAAG CGGCCTGGGG CCGCCCATGG AACGATGTAT TCGTCCACGA CAACGGACTA TTAAATCGAC CTGAGAATAG TTTTGTGCCC TCAGGACCCG AGGAAACCGT TCAGATGCAC CGTATTGCCG ATCATCTTCT GTTGCGCATT CATCGGCGCC AGACGCACCG CCGCCTGCAT TGGCTGCGGG AGCCAATCGA ACGACTGATG AGCCGCGTTT TTTAG
|
Protein sequence | MSDPPAMART RRLILHAGTH KTASSDIQCR LRRSASLLAD QKIIYQFPDE DQWDFKQLVK AMSKERWGPW HSYLKRWSKT DADVLISAEQ FGPQLTCVGA VSALQTIARE HGFKLTIVIF IRSQLDYINS RYGYSLKRFY HSKTFAEYVQ DVLDGERMIK GKAVEIDNRR SDIFDFWNYF SSLLNERNCG LDVRFIPFRQ THPDPFIQFL HSLELDPSLP WAEHRESSLN SGTGPRGTWL ARELSQRLRH HGISPRAISG STTIIPKETA FRGWDDGKFW GFNAALAHRV QDHFKANNNF FAQAAWGRPW NDVFVHDNGL LNRPENSFVP SGPEETVQMH RIADHLLLRI HRRQTHRRLH WLREPIERLM SRVF
|
| |