Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0332 |
Symbol | psaB |
ID | 3737412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 342536 |
End bp | 344749 |
Gene Length | 2214 bp |
Protein Length | 737 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637774917 |
Product | photosystem I P700 chlorophyll a apoprotein A2 |
Protein accession | YP_380663 |
Protein GI | 78211884 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01336] photosystem I core protein PsaB |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0306945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0992407 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACGA AATTTCCTTC GTTCAGCCAG GGTCTGGCCC AGGACCCGAC AACCCGCCGT ATTTGGTACG GGATCGCCAC GGCTCACGAC TTCGAGAGCC ATGACGGAAT GACGGAGGAG CGCCTCTATC AGAAGCTCTT CTCCACTCAT TTCGGTCACC TCGCGATCAT CGGCCTGTGG GTTTCGGGAA ACCTGTTCCA CATCGCCTGG CAGGGCAACT TCGAGCAGTG GGTCGCCGAC CCCCTGCACG TGCGCCCCAT CGCTCACGCA ATCTGGGATC CCCACTTCGG TCAAGGCGCC ATTGACGCCT TCACCCAAGC GGGCGCTTCC TCCCCGGTGA ACATCGCCTA CTCAGGCCTG TATCACTGGT TCTACACAAT CGGCATGAAG ACAAATGCCG AGCTGTATCA GGGTTCCATC TTCATGATGA TCCTGTCGGC TTGGGCTCTC TTCGCCGGCT GGTTGCACCT GCAGCCCAAG TTCCGTCCTT CCCTGGCCTG GTTCAAAAAC GCTGAATCGC GTCTGAACCA CCACCTTGCT GTCCTCTTCG GCTTCAGCTC AATCGCCTGG ACCGGTCACC TGGTTCACGT TGCGATCCCC GAAGCCCGCG GTCAGCACGT TGGTTGGGAC AACTTCCTCA ATGTTCTGCC TCACCCCGCC GGTCTTGGAC CCTTCTTCAC CGGTAACTGG GGTGTGTACG CCGAAAACCC CGATTCTCTG AATCAGGTCT TCGGTAGTTC CGAAGGTGCC GGCACCGCCA TCCTCACCTT CCTCGGTGGT TTCCACCCTC AGACAGAAGC CCTCTGGCTG ACGGACATCG CCCACCACCA CCTGGCCATC GGTTGCATCT TCGTGATCGC CGGCCACATG TACCGGACCA ACTTCGGTAT CGGTCACTCC ATCAAGGAGA TCCTCGAAAC CCACAACCCC CCGAAGGGCA CCCCCGGTGA CCTCGGCGCT GGCCACAAGG GTCTCTACGA CACCATCAAC AACAGCCTGC ACTTCCAGCT GGGTCTTGCT CTCGCCTCCC TCGGCGTGGT CACCAGCCTC GTGGCGCAGC ACATGTACTC GATGCCGTCG TACGCCTTCA TCGCGAAGGA CTACACGACT CAGGCAGCCC TGTACACCCA CCATCAGTAC ATCGCCATAG CGTTGATGTG TGGTGCCTTC GCCCACGGTG CGATCTTCTT CATCCGTGAC TACGACCCCG AAGCCAACAA GGACAACGTC CTGGCTCGGA TGCTCGAGCA CAAGGAAGCG ATCATCAGCC ACCTGAGCTG GGTCTCCCTG TTCCTCGGCT TCCACACCCT CGGCCTTTAC GTCCACAACG ATGTGGTCGT TGCCTTCGGT ACCCCCGAGA AGCAGATCCT GGTTGAGCCC GTGTTCGCCC AGTTCGTTCA GGCCGCCTCT GGTAAGGCCA TGTACGGAAT GGACGTGCTG CTCTCCAACG CCTCCAGCTC CGCCAGCCTT GCTGCCCAGA ACATTCCTGG TGAGCACTAC TGGCTGGACG CGATCAATGG CAACACCGAT GTGTTCCTGC CCATCGGCCC TGGTGACTTC CTGGTTCACC ACGCCATTGC TCTGGGTCTG CACACCACCA CCCTGATCCT TGTGAAGGGT GCCCTTGATG CCCGCGGCTC CAAGCTGATG CCCGACAAGA AGGACTTCGG CTATTCATTC CCCTGCGACG GCCCGGGCCG TGGCGGCACC TGCGACATCT CTGCCTGGGA CGCCTTCTAC CTGGCTGTCT TCTGGGCTTT GAACACCGTG GGTTGGCTGA CTTTCTACTG GCACTGGAAG CACCTGGCCA TCTGGTCCGG CAACGTGGCC CAGTTCAACG AATCCAGCAC CTACCTGATG GGCTGGTTCC GTGACTACCT GTGGCTCAAC TCCTCCCAGT TGATCAATGG CTACAACCCG TTCGGCAGCA ACAACCTCGC CGTCTGGGCT TGGATGTTCC TCTTCGGACA CCTGGTTTGG GCCACCGGCT TCATGTTCCT GATCTCCTGG CGGGGTTACT GGCAGGAACT GATCGAGACC ATCGTCTGGG CTCACCAGCG CAGCCCCATC GCCAACATGA TGGGTTACCG CGACAAGCCC GTGGCACTGT CCATCGTTCA GGCCCGTGTC GTCGGCTTGG CTCACTTCAC GGTTGGCTAC GTCCTGACGT ATGCCGCCTT CCTGATTGCC TCGACTTCAG GAAAATTCGG TTAA
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Protein sequence | MATKFPSFSQ GLAQDPTTRR IWYGIATAHD FESHDGMTEE RLYQKLFSTH FGHLAIIGLW VSGNLFHIAW QGNFEQWVAD PLHVRPIAHA IWDPHFGQGA IDAFTQAGAS SPVNIAYSGL YHWFYTIGMK TNAELYQGSI FMMILSAWAL FAGWLHLQPK FRPSLAWFKN AESRLNHHLA VLFGFSSIAW TGHLVHVAIP EARGQHVGWD NFLNVLPHPA GLGPFFTGNW GVYAENPDSL NQVFGSSEGA GTAILTFLGG FHPQTEALWL TDIAHHHLAI GCIFVIAGHM YRTNFGIGHS IKEILETHNP PKGTPGDLGA GHKGLYDTIN NSLHFQLGLA LASLGVVTSL VAQHMYSMPS YAFIAKDYTT QAALYTHHQY IAIALMCGAF AHGAIFFIRD YDPEANKDNV LARMLEHKEA IISHLSWVSL FLGFHTLGLY VHNDVVVAFG TPEKQILVEP VFAQFVQAAS GKAMYGMDVL LSNASSSASL AAQNIPGEHY WLDAINGNTD VFLPIGPGDF LVHHAIALGL HTTTLILVKG ALDARGSKLM PDKKDFGYSF PCDGPGRGGT CDISAWDAFY LAVFWALNTV GWLTFYWHWK HLAIWSGNVA QFNESSTYLM GWFRDYLWLN SSQLINGYNP FGSNNLAVWA WMFLFGHLVW ATGFMFLISW RGYWQELIET IVWAHQRSPI ANMMGYRDKP VALSIVQARV VGLAHFTVGY VLTYAAFLIA STSGKFG
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