Gene Syncc9605_0332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0332 
SymbolpsaB 
ID3737412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp342536 
End bp344749 
Gene Length2214 bp 
Protein Length737 aa 
Translation table11 
GC content60% 
IMG OID637774917 
Productphotosystem I P700 chlorophyll a apoprotein A2 
Protein accessionYP_380663 
Protein GI78211884 
COG category 
COG ID 
TIGRFAM ID[TIGR01336] photosystem I core protein PsaB 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0306945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0992407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGA AATTTCCTTC GTTCAGCCAG GGTCTGGCCC AGGACCCGAC AACCCGCCGT 
ATTTGGTACG GGATCGCCAC GGCTCACGAC TTCGAGAGCC ATGACGGAAT GACGGAGGAG
CGCCTCTATC AGAAGCTCTT CTCCACTCAT TTCGGTCACC TCGCGATCAT CGGCCTGTGG
GTTTCGGGAA ACCTGTTCCA CATCGCCTGG CAGGGCAACT TCGAGCAGTG GGTCGCCGAC
CCCCTGCACG TGCGCCCCAT CGCTCACGCA ATCTGGGATC CCCACTTCGG TCAAGGCGCC
ATTGACGCCT TCACCCAAGC GGGCGCTTCC TCCCCGGTGA ACATCGCCTA CTCAGGCCTG
TATCACTGGT TCTACACAAT CGGCATGAAG ACAAATGCCG AGCTGTATCA GGGTTCCATC
TTCATGATGA TCCTGTCGGC TTGGGCTCTC TTCGCCGGCT GGTTGCACCT GCAGCCCAAG
TTCCGTCCTT CCCTGGCCTG GTTCAAAAAC GCTGAATCGC GTCTGAACCA CCACCTTGCT
GTCCTCTTCG GCTTCAGCTC AATCGCCTGG ACCGGTCACC TGGTTCACGT TGCGATCCCC
GAAGCCCGCG GTCAGCACGT TGGTTGGGAC AACTTCCTCA ATGTTCTGCC TCACCCCGCC
GGTCTTGGAC CCTTCTTCAC CGGTAACTGG GGTGTGTACG CCGAAAACCC CGATTCTCTG
AATCAGGTCT TCGGTAGTTC CGAAGGTGCC GGCACCGCCA TCCTCACCTT CCTCGGTGGT
TTCCACCCTC AGACAGAAGC CCTCTGGCTG ACGGACATCG CCCACCACCA CCTGGCCATC
GGTTGCATCT TCGTGATCGC CGGCCACATG TACCGGACCA ACTTCGGTAT CGGTCACTCC
ATCAAGGAGA TCCTCGAAAC CCACAACCCC CCGAAGGGCA CCCCCGGTGA CCTCGGCGCT
GGCCACAAGG GTCTCTACGA CACCATCAAC AACAGCCTGC ACTTCCAGCT GGGTCTTGCT
CTCGCCTCCC TCGGCGTGGT CACCAGCCTC GTGGCGCAGC ACATGTACTC GATGCCGTCG
TACGCCTTCA TCGCGAAGGA CTACACGACT CAGGCAGCCC TGTACACCCA CCATCAGTAC
ATCGCCATAG CGTTGATGTG TGGTGCCTTC GCCCACGGTG CGATCTTCTT CATCCGTGAC
TACGACCCCG AAGCCAACAA GGACAACGTC CTGGCTCGGA TGCTCGAGCA CAAGGAAGCG
ATCATCAGCC ACCTGAGCTG GGTCTCCCTG TTCCTCGGCT TCCACACCCT CGGCCTTTAC
GTCCACAACG ATGTGGTCGT TGCCTTCGGT ACCCCCGAGA AGCAGATCCT GGTTGAGCCC
GTGTTCGCCC AGTTCGTTCA GGCCGCCTCT GGTAAGGCCA TGTACGGAAT GGACGTGCTG
CTCTCCAACG CCTCCAGCTC CGCCAGCCTT GCTGCCCAGA ACATTCCTGG TGAGCACTAC
TGGCTGGACG CGATCAATGG CAACACCGAT GTGTTCCTGC CCATCGGCCC TGGTGACTTC
CTGGTTCACC ACGCCATTGC TCTGGGTCTG CACACCACCA CCCTGATCCT TGTGAAGGGT
GCCCTTGATG CCCGCGGCTC CAAGCTGATG CCCGACAAGA AGGACTTCGG CTATTCATTC
CCCTGCGACG GCCCGGGCCG TGGCGGCACC TGCGACATCT CTGCCTGGGA CGCCTTCTAC
CTGGCTGTCT TCTGGGCTTT GAACACCGTG GGTTGGCTGA CTTTCTACTG GCACTGGAAG
CACCTGGCCA TCTGGTCCGG CAACGTGGCC CAGTTCAACG AATCCAGCAC CTACCTGATG
GGCTGGTTCC GTGACTACCT GTGGCTCAAC TCCTCCCAGT TGATCAATGG CTACAACCCG
TTCGGCAGCA ACAACCTCGC CGTCTGGGCT TGGATGTTCC TCTTCGGACA CCTGGTTTGG
GCCACCGGCT TCATGTTCCT GATCTCCTGG CGGGGTTACT GGCAGGAACT GATCGAGACC
ATCGTCTGGG CTCACCAGCG CAGCCCCATC GCCAACATGA TGGGTTACCG CGACAAGCCC
GTGGCACTGT CCATCGTTCA GGCCCGTGTC GTCGGCTTGG CTCACTTCAC GGTTGGCTAC
GTCCTGACGT ATGCCGCCTT CCTGATTGCC TCGACTTCAG GAAAATTCGG TTAA
 
Protein sequence
MATKFPSFSQ GLAQDPTTRR IWYGIATAHD FESHDGMTEE RLYQKLFSTH FGHLAIIGLW 
VSGNLFHIAW QGNFEQWVAD PLHVRPIAHA IWDPHFGQGA IDAFTQAGAS SPVNIAYSGL
YHWFYTIGMK TNAELYQGSI FMMILSAWAL FAGWLHLQPK FRPSLAWFKN AESRLNHHLA
VLFGFSSIAW TGHLVHVAIP EARGQHVGWD NFLNVLPHPA GLGPFFTGNW GVYAENPDSL
NQVFGSSEGA GTAILTFLGG FHPQTEALWL TDIAHHHLAI GCIFVIAGHM YRTNFGIGHS
IKEILETHNP PKGTPGDLGA GHKGLYDTIN NSLHFQLGLA LASLGVVTSL VAQHMYSMPS
YAFIAKDYTT QAALYTHHQY IAIALMCGAF AHGAIFFIRD YDPEANKDNV LARMLEHKEA
IISHLSWVSL FLGFHTLGLY VHNDVVVAFG TPEKQILVEP VFAQFVQAAS GKAMYGMDVL
LSNASSSASL AAQNIPGEHY WLDAINGNTD VFLPIGPGDF LVHHAIALGL HTTTLILVKG
ALDARGSKLM PDKKDFGYSF PCDGPGRGGT CDISAWDAFY LAVFWALNTV GWLTFYWHWK
HLAIWSGNVA QFNESSTYLM GWFRDYLWLN SSQLINGYNP FGSNNLAVWA WMFLFGHLVW
ATGFMFLISW RGYWQELIET IVWAHQRSPI ANMMGYRDKP VALSIVQARV VGLAHFTVGY
VLTYAAFLIA STSGKFG