| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0331 |
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| Symbol | psaA |
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| ID | 3737411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 340210 |
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| End bp | 342513 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637774916 |
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| Product | photosystem I P700 chlorophyll a apoprotein A1 |
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| Protein accession | YP_380662 |
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| Protein GI | 78211883 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01335] photosystem I core protein PsaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.151933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.111224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCA GCCCACCTGA GCGTGGGAGT GACGCGAAAA GCCAGGTCGA GAAGGTTGAC
AATCCAGCAA CCTTCGAGCT GTTCGGTAAG CCCGGACACT TTGACCGAGC TCTCGCGAAA
GGTCCCAAAA CCACCACCTG GGTTTGGAAC CTTCACGCCA ACGCTCACGA CTTCGACGCT
CACACGAGCG ACCTTCAAGA GGTCTCTCGG CGGATCTTCT CCGCCCATTT CGGCCACCTG
GCCGTCATCT TCATCTGGCT CAGCGGTGCC TTCTTCCATG GCGCCCGCTT CTCCAACTAT
TCCGGTTGGC TTGCTGACCC CACCCATGTG AAGCCAAGCG CCCAGCAGGT CTGGGCCGTC
TTCGGCCAAG AAGTTCTCAA TGGCGACATG GGTGCCGGTT TCCAAGGCAT CCAAATCACC
TCAGGCCTCT TCCAGATGTG GCGGGCCTGG GGCATCACCA GCGAAACCCA GCTCATGGCT
CTGGCCATCG GTGCTCTGGT GATGGCCGGC CTCATGCTCA ACGCCGGTGT TTTCCACTAC
CACAAGGCTG CGCCGAAGCT GGAGTGGTTC CAGAACGTTG AGTCGATGCT GAACCACCAC
CTGGCAGGTC TGCTGGGTCT TGGTTCACTG TCCTGGGCTG GTCACGTCAT CCACGTGTCT
GCCCCTGTCA CCAAGTTGAT GGATGCCATC GATGCCGGCC AACCGCTGGT GCTGAATGGC
AAGACCATCG CTTCGGCTGC AGACATTCCG CTGCCCCACG AGTTCTTCAA TCAGGACCTG
CTGGCGCAGC TGTATCCAGG CTTCAGTGCT GGTGTCGGTG CCTTCTTCTC CGGCAACTGG
GCTGCTTACA GCGATTTCCT CACCTTCAAG GGTGGTTTGA ATCCTGTGAC GGGAAGCCTC
TGGATGACCG ACATCGCCCA CCACCATGTG GCGATCGCCG TGATGTTCAT CGTTGCCGGT
CACATGTACC GGACTAACTG GGGCATCGGT CACTCCATCA AGGAGATCCA CGAAGGCCAG
AAGGGTGATC CCCTGCTGTT CCCTGCCACC AACGGTCACG ACGGTCTTTA CGACTTCATG
ACCAATTCCT GGCATGCCCA GCTGGCGGTC AACCTCGCCA TCGGCGGTTC AGTGAGCATC
ATCGTTGCTC AGCACATGTA CGCGATGCCT CCGTATCCGT ACCAAGCGAT CGACTACCCC
ACCCAGATCG GGCTCTTCAC CCATCACATC TGGATCGGCG GTTTCCTGAT CGTTGGTGCC
GGCGCTCACG CCGCCATCGC CATGGTTCGC GATTATGACC CCGCCAAGCA CATCGACAAC
GTGCTGGATC GGGTGCTCAA GGCTCGCGAC GCCATCATCA GTCACCTCAA CTGGGTCTGC
ATCTGGCTCG GAGCCCACAG CTTCGGCCTG TACATCCACA ACGACACCAT GCGTGCCCTG
GGTCGTCCCC AGGACATGTT CAGCGATTCG GCCATCTCCA TTCAGCCGAT CTTTGCTCAG
TGGATTCAGA ACGTGCACGC CGCAGCTGCC GGCAGCACGG CTCCCAACGC CCTCGCCGGT
GTGAGTGAAG TGTTCAACGG TTCCGTTGTC GCCGTCGGCG GCAAGGTTGC CGCTGCTCCC
ATGCCGCTCG GCACCGCCGA CTTCATGGTT CACCACATCC ACGCCTTCAC GATTCACGTG
ACGGTGTTGA TCCTGCTGAA GGGTGTCTTG TATGCCCGTA GCTCCCGCCT CATCCCTGAT
AAGGCCAACC TGGGCTTCCG ATTCTCCTGC GACGGTCCTG GTCGTGGTGG CACCTGCCAG
GTCTCCGCTT GGGACCACGT GTTCCTGGGC CTGTTCTGGA TGTACAACTC CCTGTCAATC
GTGATCTTCC ACTTCTCCTG GAAGATGCAG AGCGACATCT GGGGAACGGT GAATGCCGAC
GGTTCCGTCG CGCACATCAC CAACGGCAAC TTTGCCCAAA GCGCCATCAC CATCAATGGC
TGGCTGCGTG ACTATCTGTG GGCTCAGGCC GTTCAGGTGA TCAACAGCTA TGGCTCGAAC
ACAGCCGCCT ACGGAATCAT GTTCCTCGGC GCCCACTTCG TGTTCGCCTT CAGCCTGATG
TTCCTCTTCA GTGGCCGCGG CTACTGGCAG GAACTGATCG AGTCCATCGT CTGGGCTCAC
AACAAGCTGA AGGTGGCTCC CGCCATCCAG CCCCGTGCTC TTTCCATCAT CCAAGGCCGT
GCAGTGGGTG TTGCCCACTA CCTCTTGGGC GGAATTGCGA CCACGTGGGC CTTCTTCCAC
GCCCACATTC TTGTGGTCGG CTGA
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| Protein sequence | MTISPPERGS DAKSQVEKVD NPATFELFGK PGHFDRALAK GPKTTTWVWN LHANAHDFDA
HTSDLQEVSR RIFSAHFGHL AVIFIWLSGA FFHGARFSNY SGWLADPTHV KPSAQQVWAV
FGQEVLNGDM GAGFQGIQIT SGLFQMWRAW GITSETQLMA LAIGALVMAG LMLNAGVFHY
HKAAPKLEWF QNVESMLNHH LAGLLGLGSL SWAGHVIHVS APVTKLMDAI DAGQPLVLNG
KTIASAADIP LPHEFFNQDL LAQLYPGFSA GVGAFFSGNW AAYSDFLTFK GGLNPVTGSL
WMTDIAHHHV AIAVMFIVAG HMYRTNWGIG HSIKEIHEGQ KGDPLLFPAT NGHDGLYDFM
TNSWHAQLAV NLAIGGSVSI IVAQHMYAMP PYPYQAIDYP TQIGLFTHHI WIGGFLIVGA
GAHAAIAMVR DYDPAKHIDN VLDRVLKARD AIISHLNWVC IWLGAHSFGL YIHNDTMRAL
GRPQDMFSDS AISIQPIFAQ WIQNVHAAAA GSTAPNALAG VSEVFNGSVV AVGGKVAAAP
MPLGTADFMV HHIHAFTIHV TVLILLKGVL YARSSRLIPD KANLGFRFSC DGPGRGGTCQ
VSAWDHVFLG LFWMYNSLSI VIFHFSWKMQ SDIWGTVNAD GSVAHITNGN FAQSAITING
WLRDYLWAQA VQVINSYGSN TAAYGIMFLG AHFVFAFSLM FLFSGRGYWQ ELIESIVWAH
NKLKVAPAIQ PRALSIIQGR AVGVAHYLLG GIATTWAFFH AHILVVG
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