Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0307 |
Symbol | |
ID | 3737541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 309915 |
End bp | 310994 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637774891 |
Product | photosystem q(b) protein |
Protein accession | YP_380638 |
Protein GI | 78211859 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01151] photosystem II, DI subunit (also called Q(B)) |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCA CCCTCCAGCA GCGCTCCGGC GCTTCCAGCT GGCAGGCCTT CTGTGAGTGG GTCACCTCCA CCAACAACCG TCTGTATGTC GGTTGGTTCG GTGTGCTGAT GATCCCCACA CTGCTGGCTG CCACCATCTG CTTCGTCATC GCTTTCGTCG CCGCTCCTCC GGTCGACATC GATGGCATCC GTGAGCCCGT CGCTGGCTCC CTGATCTACG GCAACAACAT CATCTCTGGT GCTGTTGTTC CTTCCAGCAA CGCCATCGGC CTGCACTTCT ACCCCATCTG GGAAGCTGCT TCCCTCGATG AGTGGCTGTA CAACGGCGGC CCCTTCCAGC TGGTTGTTTT CCACTTCCTC ATCGGCATCT ACGCCTACAT GGGTCGTGAG TGGGAACTCT CCTACCGCCT GGGCATGCGC CCCTGGATCT GCGTTGCCTA CAGCGCACCT GTCGCTGCAG CCTCCGCTGT CTTCCTGGTT TACCCCTTCG GTCAGGGTTC TTTCTCTGAC GCAATGCCCC TGGGCATCTC TGGCACCTTC AACTACATGT TGGTGTTCCA GGCCGAGCAC AACATCCTGA TGCACCCCTT CCACATGCTG GGCGTCGCAG GTGTTTTCGG CGGCAGCTTG TTCTCCGCCA TGCACGGCTC CCTGGTGACT TCCTCCCTGG TGCGTGAAAC CACCGAGAGC GAGTCTCAGA ACTACGGCTA CAAGTTTGGC CAAGAGGAAG AGACCTACAA CATCGTGGCT GCCCACGGTT ACTTCGGTCG CCTGATCTTC CAATACGCCT CCTTCAACAA CAGCCGTAGC CTTCACTTCT TCCTGGCTGC CTGGCCTGTT GTCGGCATCT GGTTCACCGC CCTCGGCGTG TCAACCATGG CCTTCAACCT GAACGGCTTC AACTTCAACC AGTCCATCCT TGATGGTCAG GGCCGCGTCC TGAACACCTG GGCTGATGTG CTGAACCGTG CCGGCCTCGG CATGGAAGTG ATGCACGAGC GCAACGCTCA CAACTTCCCC CTCGACCTGG CTGCTGCTGA GTCCACTCCT GTGGCTCTGC AGGCTCCTGC CATCGGTTGA
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Protein sequence | MTTTLQQRSG ASSWQAFCEW VTSTNNRLYV GWFGVLMIPT LLAATICFVI AFVAAPPVDI DGIREPVAGS LIYGNNIISG AVVPSSNAIG LHFYPIWEAA SLDEWLYNGG PFQLVVFHFL IGIYAYMGRE WELSYRLGMR PWICVAYSAP VAAASAVFLV YPFGQGSFSD AMPLGISGTF NYMLVFQAEH NILMHPFHML GVAGVFGGSL FSAMHGSLVT SSLVRETTES ESQNYGYKFG QEEETYNIVA AHGYFGRLIF QYASFNNSRS LHFFLAAWPV VGIWFTALGV STMAFNLNGF NFNQSILDGQ GRVLNTWADV LNRAGLGMEV MHERNAHNFP LDLAAAESTP VALQAPAIG
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