Gene Syncc9605_0307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0307 
Symbol 
ID3737541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp309915 
End bp310994 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content60% 
IMG OID637774891 
Productphotosystem q(b) protein 
Protein accessionYP_380638 
Protein GI78211859 
COG category 
COG ID 
TIGRFAM ID[TIGR01151] photosystem II, DI subunit (also called Q(B)) 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CCCTCCAGCA GCGCTCCGGC GCTTCCAGCT GGCAGGCCTT CTGTGAGTGG 
GTCACCTCCA CCAACAACCG TCTGTATGTC GGTTGGTTCG GTGTGCTGAT GATCCCCACA
CTGCTGGCTG CCACCATCTG CTTCGTCATC GCTTTCGTCG CCGCTCCTCC GGTCGACATC
GATGGCATCC GTGAGCCCGT CGCTGGCTCC CTGATCTACG GCAACAACAT CATCTCTGGT
GCTGTTGTTC CTTCCAGCAA CGCCATCGGC CTGCACTTCT ACCCCATCTG GGAAGCTGCT
TCCCTCGATG AGTGGCTGTA CAACGGCGGC CCCTTCCAGC TGGTTGTTTT CCACTTCCTC
ATCGGCATCT ACGCCTACAT GGGTCGTGAG TGGGAACTCT CCTACCGCCT GGGCATGCGC
CCCTGGATCT GCGTTGCCTA CAGCGCACCT GTCGCTGCAG CCTCCGCTGT CTTCCTGGTT
TACCCCTTCG GTCAGGGTTC TTTCTCTGAC GCAATGCCCC TGGGCATCTC TGGCACCTTC
AACTACATGT TGGTGTTCCA GGCCGAGCAC AACATCCTGA TGCACCCCTT CCACATGCTG
GGCGTCGCAG GTGTTTTCGG CGGCAGCTTG TTCTCCGCCA TGCACGGCTC CCTGGTGACT
TCCTCCCTGG TGCGTGAAAC CACCGAGAGC GAGTCTCAGA ACTACGGCTA CAAGTTTGGC
CAAGAGGAAG AGACCTACAA CATCGTGGCT GCCCACGGTT ACTTCGGTCG CCTGATCTTC
CAATACGCCT CCTTCAACAA CAGCCGTAGC CTTCACTTCT TCCTGGCTGC CTGGCCTGTT
GTCGGCATCT GGTTCACCGC CCTCGGCGTG TCAACCATGG CCTTCAACCT GAACGGCTTC
AACTTCAACC AGTCCATCCT TGATGGTCAG GGCCGCGTCC TGAACACCTG GGCTGATGTG
CTGAACCGTG CCGGCCTCGG CATGGAAGTG ATGCACGAGC GCAACGCTCA CAACTTCCCC
CTCGACCTGG CTGCTGCTGA GTCCACTCCT GTGGCTCTGC AGGCTCCTGC CATCGGTTGA
 
Protein sequence
MTTTLQQRSG ASSWQAFCEW VTSTNNRLYV GWFGVLMIPT LLAATICFVI AFVAAPPVDI 
DGIREPVAGS LIYGNNIISG AVVPSSNAIG LHFYPIWEAA SLDEWLYNGG PFQLVVFHFL
IGIYAYMGRE WELSYRLGMR PWICVAYSAP VAAASAVFLV YPFGQGSFSD AMPLGISGTF
NYMLVFQAEH NILMHPFHML GVAGVFGGSL FSAMHGSLVT SSLVRETTES ESQNYGYKFG
QEEETYNIVA AHGYFGRLIF QYASFNNSRS LHFFLAAWPV VGIWFTALGV STMAFNLNGF
NFNQSILDGQ GRVLNTWADV LNRAGLGMEV MHERNAHNFP LDLAAAESTP VALQAPAIG