Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0304 |
Symbol | |
ID | 3737538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 307347 |
End bp | 308447 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637774888 |
Product | chorismate synthase |
Protein accession | YP_380635 |
Protein GI | 78211856 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0082] Chorismate synthase |
TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.21806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATGG GCAGCAGCTT CGGCGACCTC TTCCGGATCA GCACCTTCGG TGAATCCCAC GGGGGAGGGG TGGGTGTGAT TGTTGAGGGC TGTCCACCAC GGCTCAACCT CAGCGTCGAA TCGATTCAGG CCGAACTGGA TCGACGCAAG CCAGGCCAGA GTCACATCAC CACACCGCGC AAGGAAGCGG ACCAGGTGCA AGTTCTCAGT GGCCTGCTGG ATGGCGAGAC CACGCTTGGC ACCCCAATCG CCATGGTCGT GCGGAACAAG GACCAACGGC CGGGGGATTA CAAGGACATG GCGGTCGCCT TCCGCCCATC CCATGCCGAT GCCACATACC AGGCGAAATA TGGAATCCAG GCCCGCAGCG GTGGGGGCCG TGCATCGGCG CGGGAAACCA TCGGCCGTGT CGCTGCAGGT GCAATCGCCA AGCAGCTGCT GAAACAAGCG GCAGGAACTG AAATCCTGGC CTGGGTGAAG CGGATCCACA ACATCGAAGC CTCCGGCATC GACCCGCAAC GGGTTCAGCT CAGTGATGTA GAAGCCAACA TCGTGCGATG TCCCGAATCG GCAGTAGCCG AGCGGATGGT TGAGCGCATC GAAGCCATCG GCCGCGAAGG TGATTCCTGC GGCGGGGTGA TCGAATGCGT GGTGCGCCAT CCCGCCGTTG GTTTAGGCAT GCCGGTGTTC GACAAACTCG AAGCCGACCT CGCCAAAGCT GTGATGTCGT TACCGGCCAC CAAGGGTTTT GAAATTGGAT CCGGTTTCGA TGGAACGCTG TTGAAAGGCA GCGAGCACAA CGATGCTTTT CTGCCGAGCG ACGACGGTCG GCTGAAGACC GCCACCAACA ACTCCGGCGG CATCCAGGGG GGCATCAGCA ATGGTGAGCC GATTGTGATC CGGGTAGCCT TCAAGCCAAC GGCCACGATC CGCAAAGAGC AGCAGACCAT CGATTCCGAT GGCAAGGCCA CCACACTCGC AGGGAAAGGA CGGCATGACC CCTGCGTTCT GCCACGGGCT GTACCGATGG TGGAGGCGAT GGTGGCACTC GTTCTGGCTG ATCACCTGCT GAGGCAACAG GGGCAATGCA GCCTTTGGTG A
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Protein sequence | MAMGSSFGDL FRISTFGESH GGGVGVIVEG CPPRLNLSVE SIQAELDRRK PGQSHITTPR KEADQVQVLS GLLDGETTLG TPIAMVVRNK DQRPGDYKDM AVAFRPSHAD ATYQAKYGIQ ARSGGGRASA RETIGRVAAG AIAKQLLKQA AGTEILAWVK RIHNIEASGI DPQRVQLSDV EANIVRCPES AVAERMVERI EAIGREGDSC GGVIECVVRH PAVGLGMPVF DKLEADLAKA VMSLPATKGF EIGSGFDGTL LKGSEHNDAF LPSDDGRLKT ATNNSGGIQG GISNGEPIVI RVAFKPTATI RKEQQTIDSD GKATTLAGKG RHDPCVLPRA VPMVEAMVAL VLADHLLRQQ GQCSLW
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