Gene Syncc9605_0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0290 
Symbol 
ID3735975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp295185 
End bp295841 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content59% 
IMG OID637774873 
Producthypothetical protein 
Protein accessionYP_380621 
Protein GI78211842 
COG category[S] Function unknown 
COG ID[COG1738] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00697] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAACA TCCTGGGGCT GACTCGCTTC CTTCAGCTGG GCAGCATTGG CAGCTGGCCG 
ATCGTGGTGG CCGTTGGCGC ACTGCCCTAC CCGATCACGT TCCTCTGCAC TGATCTGATC
AGCGAACTCT GGGGAGAACA GAAAGCGAAT CAGGTGGTGT GGGTCGGGCT GCTGCTCAAC
GGCTGGGTGC TGCTGATCCT CTGGCTGGGG GGCGTTCTGC CGAGCATGAG CGGCAGTGAT
GACAGCACTT TTCGCACGAT TCAGCAGCTC AGTTTCGGTT CTGTTGGAGC CTCGATGGTT
GCCTATCTCA CGGCGCAGTT CGTGGACGTG CGGCTGTTCC ATTTCTGGAA ACAGCTCACA
AAAGGCAAAG CGCTCTGGCT GCGCAACAAC GGCTCCACCC TGGTGAGCCA GTTGGTGGAC
ACCAGTGCAG TGGTGCTGAT CAGCCACTAC GGCGCCCATG TGCTTCCTGT GCAGCCGGAA
CGGCCCGTGT TGCCGCAGCT GATCAGCTTC ATCGGCAGCG GCTATCTGTT CAAGGTGCTA
GCGGCGTTAA CCGACACGCT TCCCTTCATC TGGCTCACGG GATGGCTGAG GGAGTGGCTG
GACATGCCTG TGGAAGGAGG CGAAGTCACA ACAGAAGCCA CGTCATCGAT GCAATAA
 
Protein sequence
MLNILGLTRF LQLGSIGSWP IVVAVGALPY PITFLCTDLI SELWGEQKAN QVVWVGLLLN 
GWVLLILWLG GVLPSMSGSD DSTFRTIQQL SFGSVGASMV AYLTAQFVDV RLFHFWKQLT
KGKALWLRNN GSTLVSQLVD TSAVVLISHY GAHVLPVQPE RPVLPQLISF IGSGYLFKVL
AALTDTLPFI WLTGWLREWL DMPVEGGEVT TEATSSMQ