Gene Syncc9605_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0288 
Symbol 
ID3735973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp294168 
End bp294956 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID637774871 
Producthypothetical protein 
Protein accessionYP_380619 
Protein GI78211840 
COG category[R] General function prediction only 
COG ID[COG1402] Uncharacterized protein, putative amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.742754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTG CAACTCCCGG TCCTGTCGAC AGCACGGACG CCATTCGCCT CGCCCTGCGC 
AGTTGGCCTG AGGTAGAGAG CTACCTCCAG GGCTGCAAGG GGGTGATCAT TCCCCTGGGA
TCCACCGAGC AGCACGGCCC CACGGGCGCC ATCGGCACCG ACGCCCTCAC AGCAGAAGCG
GTGGCCCTGG AGGTGGGACG TCGCACCGGC GTCTTGGTTA CCCCAGCCCA GGCCTTCGGC
ATGGCGGAAC ACCACCTTGG TTTCGCGGGA ACGATGAGCC TGCAGCCAGC AACACTTTTG
GCCGTTCTGC ACGACCTGGT GTTGTCATTG GGCCGACATG GCTTCGAACG GGTGTTCGTG
ATCAATGGCC ACGGCGGCAA CATTGCGACG GCCAAAGCCG CCTTTGCCCA GGCCCACGGC
ACCGCCACCA CCCGCAATCT CCCCGTTGCC CCACAGCTGC GTTGTCGGCT GGCCAACTGG
TTCATGGCGG GGCCCGTGAT GCGCCAGGCA CGCGATCTAT ATGGCGACAA AGAAGGCCAT
CACGCCACGC CCAGCGAAAT CGCTGTCACC CTCGCTGTGG AGCCCAGCCT GCAGAGCAAG
CAGCGACCAC TGCCCGACCC CGCACCGGCA GGCCCCATTC ATGGACCAGA CGACTTCCGT
CGCCGTCATC CCGATGGACG CATGGGGTCC CACCCTTCCC TGGCCACCGC GCAGCATGGG
GATGCCTTGC TGGAGACAGC CGCCACCGCG TTGAGCGAGG ATCTGCGCAC GTTCCTCGGC
GAGTCATGA
 
Protein sequence
MTAATPGPVD STDAIRLALR SWPEVESYLQ GCKGVIIPLG STEQHGPTGA IGTDALTAEA 
VALEVGRRTG VLVTPAQAFG MAEHHLGFAG TMSLQPATLL AVLHDLVLSL GRHGFERVFV
INGHGGNIAT AKAAFAQAHG TATTRNLPVA PQLRCRLANW FMAGPVMRQA RDLYGDKEGH
HATPSEIAVT LAVEPSLQSK QRPLPDPAPA GPIHGPDDFR RRHPDGRMGS HPSLATAQHG
DALLETAATA LSEDLRTFLG ES