Gene Syncc9605_0259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0259 
Symbol 
ID3736188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp266467 
End bp269253 
Gene Length2787 bp 
Protein Length928 aa 
Translation table11 
GC content60% 
IMG OID637774841 
Producthypothetical protein 
Protein accessionYP_380590 
Protein GI78211811 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGCTCG TCACGGCCGG CTCGGCTGAA TCAACGCCAG AGACGGTTTC TCCAGCGCCG 
GCGCGCCTGA ACATTCGAGC TGACCTCCAA TACACGGACA CCAAATCAAA AGCCACGATT
GCCGAAGGCA ACGTTTCGGT TCAGCTCGGG CAGGCTGAAC TGCACGCTGA TCGCATTGAA
TTTGATGCGG CGTATCGCAC GCTCTACGCC CGCGGTGCCG TGCGCTTCCG GCGTGGCAAA
CAGTTTTTTC AAGCCTCGAG CTTCCGCTAC AACCTCGTCC AAAACGAAGG TCAGCTCAAC
GATGTTTACG GGGTCATCGA CCTTGAAGAG CCCCTTACCA ATCCATTAAC AAGCTCTCGA
ACAACATCAG CCCCGCCTGA GCCAGCCACC TCAGCCAGCC GTGAAGACAT GCCTCCGGTG
GCTTGTCCAC CGCTGCTTCC CCCGGTTCCG GACTGGCATC CGCAACCTTG GGCAGTGACG
GCCTGGGGCG GTCAGATGAT TGATGCCGCC TTCGGGGACA CCTTCCTGTT CAACGGTCGA
ATGCGTCCGG AAGCCGTTTT GGGCGTCGGC GTGCAGAAAC GGATCATGCG CGCTGGTCCA
TTCGCCATTG AACTTGAGGC TGACCTGTTC AGCCACATCG CCAAGCAGCA ACAGGGTGGC
GAATTCAACC AGAGCAAGCC CTATGCCGAT CTGCCGGCAC AGAACTTCGG CGAGGGGGTG
CTGGGGATTG GAGCACGCGT CTGGGTTCAG CCTTGGCTGA GCTTCAGCGT CATCGAAGGC
ATCAGCTACA ACTCCAACGT CAGCCTCTAC GAGAAAACAT TCCGCGAGAA CTACACCCAG
CTGTTGAACT ATCTCGGCTT CGAGGTGGAG GCAGCGGTGT CCTCCGACTT ATCGCTCGTG
GGCCGGATTC ACCACCGCTC CGGTGCTTTC GGCACCTATG GAGGCGTCAC TGAGGGCAGC
AATGCCTACT TGCTCGGCTT GCGCTACCGC TGGGGACGGG ACACACCCAA GCAGGCGAGC
GACGTGATGC CGCCCATGCT GGAGTGTGAC GACCCGGATC GCGGCCAGCG CTTCAAGCCC
TCCTCCCTCT CCGAGCGCCT CGACTCGATT GCCCTCGGCG ATGGAGGAAG CCCTCAACGC
CATGTCAGCA GCGACAACAC AGCGGAGCAA CCCACGATTC CGCCAGCCCA GCAGCAGGCC
ATGCGGACTG AAGCGATCGC CAGGATCAAC CAACGCATCT CAGACGTCGA CCTCCAGGGC
AGCTTCAGCA TCGAACGGCG CAGCGGCATC CCCGTTCAAC GCCTGAATTC CTCGGTCAGG
GATGAAAACC GCTTTGGCGT GGTCAAAGTT CCCCAACTGA AGAGCCTGGG AAGCACGAAT
TTCCTCAACG GCACGATCAG CCGCTGGAGG GTGCAGGCCT CGAAGATCCT GATCACGGCG
GATGGCTGGG AGGCTGACCG CATGGGCTTC AGCAACGATC CCTTCACGCC GGCGCAAACC
AGAATCGATG CAGAGGATGT GATCGCCCGC GAGCAAGCCA ATGGCGATGT GCTGATCTCG
GCGCGACGCA ACCGGCTGAT CGTTGAAGAG CGGCTGCCCA TCCCGGTCAC CCGTCGACAG
CTCATCCAGA AGGAAGAGGA AGTGGAGAAC CGCTTCGTTG TTGGCATCGA CAACCGGGAC
CGTGATGGCC TTTTTGTGGG ACGCAACCTC AAGCCACTCA CCATCGGTAC GAGCACGGAA
CTGTCCGTTC AACCGCAGTT CATGGTGCAG CGCGCCATTG ACGGCGACTT CAACAGCGCC
GCTGATTTAT TTGGCTTGGA CGCCAAACTG CGCGGCCGCT ACGGGAACTA CAAACTGAAC
GGCGACGCCG ACATCAGCAG CTTTGATCCC GCAGACATCC TCAGTAGCAG CCGCTACTGG
GGAAGTTTTG GCCAGGACAT CGACATGGGC AGCTTGGGCG TACTGAGCAC CAATCTGTTC
GGGGCCTACC GCTACCGCAC CTGGAATGGC TCCCTCGGTG AAACCGACAT CAATGCGGCC
TACGGCGTTT ATGCGCAGAC CAAGGGCAGC TGGTCGACAG GCGAAGTGGA CCATGACTAC
CTCATTCGCG GTGCCATCGG CGACTACGAC GCCGACCGCT TCAACAGCAA CCGCCGTTTG
CGCAGTGGGC GAGGCAGCTT GTTTGCCTCG GTCACCAGCA AGATCCCCTT GCTCAAAGGG
AAGACAGCAG AGCTGATTCC AACAGCGGCC TATCGCTATT CCCCCGTTCC CATCGTTCCG
GGGCTGAGCC TGAACACCAA CGTCAACACC TCGATTGCTG TGTACGGCGA TGGCCTTCAC
CAGGAGACCC TGAGTCTCAG CGGAGGCCCC ACCATCACCC TGGGCACCTT CAGCAAGCCC
TTCCTCGATT TCACGCAGAT CTCCATCGTC GGCAACGGCT CCCTGAAAAA TGGCGACAGC
CCGTTCGCCT TTGATCGGAA CGTCGATCTC GCCACCCTTG GGGTTGGCCT CACCCAACAA
ATTGTTGGGC CGGTCGTGCT GAGCACCGGC GTCAGCTACA ACGTCGATCC CGGTTCGAAG
TTCTACGGCA GCACCGTCAA CTCCAACATT GAATTGCGCT GGCAACGGCG CAGCTACGAC
GTGGGGGTCT ACTTCAATCC CTACAAGGGC ATTGGTGGCG TTCGCTTCCG GCTCAACGAC
TTTGACTTCA AGGGCACAGG CGTGCCGTTT GTTCCCTACA CCCCAACAAA CTGGATGGAA
ACGACAGACT CGGATCGGCC CTTCTGA
 
Protein sequence
MLLVTAGSAE STPETVSPAP ARLNIRADLQ YTDTKSKATI AEGNVSVQLG QAELHADRIE 
FDAAYRTLYA RGAVRFRRGK QFFQASSFRY NLVQNEGQLN DVYGVIDLEE PLTNPLTSSR
TTSAPPEPAT SASREDMPPV ACPPLLPPVP DWHPQPWAVT AWGGQMIDAA FGDTFLFNGR
MRPEAVLGVG VQKRIMRAGP FAIELEADLF SHIAKQQQGG EFNQSKPYAD LPAQNFGEGV
LGIGARVWVQ PWLSFSVIEG ISYNSNVSLY EKTFRENYTQ LLNYLGFEVE AAVSSDLSLV
GRIHHRSGAF GTYGGVTEGS NAYLLGLRYR WGRDTPKQAS DVMPPMLECD DPDRGQRFKP
SSLSERLDSI ALGDGGSPQR HVSSDNTAEQ PTIPPAQQQA MRTEAIARIN QRISDVDLQG
SFSIERRSGI PVQRLNSSVR DENRFGVVKV PQLKSLGSTN FLNGTISRWR VQASKILITA
DGWEADRMGF SNDPFTPAQT RIDAEDVIAR EQANGDVLIS ARRNRLIVEE RLPIPVTRRQ
LIQKEEEVEN RFVVGIDNRD RDGLFVGRNL KPLTIGTSTE LSVQPQFMVQ RAIDGDFNSA
ADLFGLDAKL RGRYGNYKLN GDADISSFDP ADILSSSRYW GSFGQDIDMG SLGVLSTNLF
GAYRYRTWNG SLGETDINAA YGVYAQTKGS WSTGEVDHDY LIRGAIGDYD ADRFNSNRRL
RSGRGSLFAS VTSKIPLLKG KTAELIPTAA YRYSPVPIVP GLSLNTNVNT SIAVYGDGLH
QETLSLSGGP TITLGTFSKP FLDFTQISIV GNGSLKNGDS PFAFDRNVDL ATLGVGLTQQ
IVGPVVLSTG VSYNVDPGSK FYGSTVNSNI ELRWQRRSYD VGVYFNPYKG IGGVRFRLND
FDFKGTGVPF VPYTPTNWME TTDSDRPF