Gene Syncc9605_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0254 
Symbol 
ID3736183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp261518 
End bp262660 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content62% 
IMG OID637774836 
Productputative glycosyltransferase 
Protein accessionYP_380585 
Protein GI78211806 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCTCT TGGCCAGCCC CATAGCGGTC GCTTCGGTCA GCTTTCTTTT GGCTGCGGTG 
ACCACCACGG TGCTGGTGCC TCAAGTTCGC AGGCTGGGGC TTCGCTTTGG GTGGACCGAT
CTGCCCGATG AGCGCAAGCA GCATGTCACC CCCATGGTGA GGCTGGGGGG CATTGCCATG
GTGCTGGGTT TTGGTACTGC TTTGACGGCT GTGTGGTCGA TGGGGGGCTT CGGCCTGCTG
GCGCCGGCCA AGGATCAGCT GATTTGGAGC ACCCTGGCCG GTTCGCTCTG CTTTTTTCTG
ATTGGCCTGG CGGACGACCT CTTCGCTCTC TCTCCTTGGC CGCGGCTGGC TGGACAGATT
GCCGTGGCTT GTTCGGTTTG GAGCCAGGGC GTTCGGATTG GAGCGATCGA TCTTCCCTGG
TTTACCGCTG CAGCCGGTCC GATTGCTCTG CCGGATACCC TCAGCCTGCT AGCCACTGTT
GTTTGGCTGG TGGGAATCAC CAACGCCATC AACTGGCTGG ATGGCCTCGA TGGCCTTGCT
GCGGGCGTGG CTGGTATTGC CGCTGTCGGG CTAGTGTCCG TCAGCTTTTC GCTGCATCAG
GTGGCCGCCG GATTCCTTGC AGCAGCCCTG GCGGGCTGCT GCCTCGGCTT CCTGCGCCAT
AACTTCAACC CCGCCCGCAT CTTCATGGGG GATGGGGGCT CTTACTTCCT CGGCTTCACC
CTCGCTGCCG TGAGCATCGT GGGACCCGCC AAGGGGCTCA CCACAGTGAG TCTGCTGCTG
CCGTTGCTTA TTCTTTCGCT GCCCCTGGCC GACATGTCGG CTGTGATCAT GGGCCGTCTG
CGCGAGGGAC GTTCCCCCTT CTATCCCGAC CGCCGTCACC TTCATCACCG CCTGCTCCGC
GCTGGCTTCA GTCACCGGCG CACGGTGCTG TTGATCTACG TCTTCACCCA GTGGCTTGCT
GCTTTGGCCT TGGTGGTGGC CAATGCTGAG ATGCGCTTCC TCTGGCTGGC TTTGGCCACG
GCCATCCTTG TGGCAACGGT GGTGATCAGC CGTCGCCAGC TGCAACATGA GCGAGCTCTG
ATGAACACCA ACCCTTGCTC CACTCCTGTT GATCCTGCGG CCCTTGGCGA ACCGCGTGGC
TGA
 
Protein sequence
MNLLASPIAV ASVSFLLAAV TTTVLVPQVR RLGLRFGWTD LPDERKQHVT PMVRLGGIAM 
VLGFGTALTA VWSMGGFGLL APAKDQLIWS TLAGSLCFFL IGLADDLFAL SPWPRLAGQI
AVACSVWSQG VRIGAIDLPW FTAAAGPIAL PDTLSLLATV VWLVGITNAI NWLDGLDGLA
AGVAGIAAVG LVSVSFSLHQ VAAGFLAAAL AGCCLGFLRH NFNPARIFMG DGGSYFLGFT
LAAVSIVGPA KGLTTVSLLL PLLILSLPLA DMSAVIMGRL REGRSPFYPD RRHLHHRLLR
AGFSHRRTVL LIYVFTQWLA ALALVVANAE MRFLWLALAT AILVATVVIS RRQLQHERAL
MNTNPCSTPV DPAALGEPRG