| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0253 |
|---|
| Symbol | glyA |
|---|
| ID | 3736182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 260108 |
|---|
| End bp | 261403 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637774835 |
|---|
| Product | serine hydroxymethyltransferase |
|---|
| Protein accession | YP_380584 |
|---|
| Protein GI | 78211805 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.604159 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGG CCTCTGGACG CGCCATCGAC GCTGATCTGG CTCAGTCGGA TCCCGACATC
GCTGCGTTCA TCAACCAGGA ACGGCAGCGT CAGGAAACCC ACCTCGAGCT GATCGCATCG
GAGAACTTTG CGTCCCGTGC GGTGATGCAG GCCCAGGGTT CCGTTCTCAC CAACAAGTAC
GCCGAGGGTC TGCCCAGCAA GCGGTACTAC GGCGGTTGTG AACACGTTGA TGCCATTGAA
GAGCTGGCCA TCGAGCGGGC CAAGCAGTTG TTTGGTGCCG CTTGGGCCAA TGTGCAGCCC
CACAGCGGTG CCCAGGCCAA CTTCGCGGTT TTCCTGGCGC TGCTACAGCC TGGCGACACG
ATCATGGGGC TCGATCTGTC CCATGGAGGT CACCTGACCC ATGGTTCCCC GGTCAACGTC
AGCGGCAAGT GGTTCAACGT CGTCCAGTAC GGCGTCGACA AGGAGACCCA ACGCCTTGAT
ATGGAGGCGA TCCGCCAGCT GGCTTTGGAG CACAAGCCGA AGCTGATTGT CTGTGGCTAC
TCCGCGTATC CACGCACCAT CGACTTCGCC GCCTTCCGCG CCATCGCTGA TGAAGTGGGT
GCCTATCTGC TGGCCGACAT GGCCCACATC GCCGGCCTCG TGGCCGCTGG AGTGCATCCC
AGCCCTGTCC CCCACTGCGA TGTGGTGACC ACCACCACCC ACAAGACCCT GCGCGGTCCC
CGCGGCGGCT TGATCCTCTG CCGCGATGCC GAGTTCGCCA AAAAGTTCGA CAAGGCCGTG
TTCCCTGGCA GCCAGGGCGG CCCTCTGGAG CACGTGATCG CTGCTAAGGC TGTGGCCTTC
GGGGAAGCAC TGCAGCCTTC GTTCAAGGCC TATAGCCAGC AGGTGGTTGC CAATGCGGCA
GCCCTCGCTG AACAGCTGAT CGCCCGCGGC ATCGATGTCG TCAGCGGCGG CACCGATAAC
CACGTGGTGC TGTTAGACCT GCGTAGCATC GGGATGACTG GAAAAGTGGC TGATCTGTTG
GTGAGTGATG TGCACATCAC GGCCAACAAG AACACCGTTC CCTTCGACCC TGAATCGCCC
TTCGTCACCA GTGGCCTGCG ATTCGGAACA GCTGCGCTCA CCACCCGTGG TTTCGATTCG
CAGGCTTTCC GGGAGGTCGC CGATGTGATT GCCGACCGTC TTTTCAATCC TGAGGATGAT
GCGATTCGTC AGCGTTGCCT CGACCGGGTG GGTGCTCTAT GTGAGCGCTT CCCCCTCTAC
GCCGACAGCA AGCACAAGCA GCCTGTTCTG GTGTGA
|
|---|
| Protein sequence | MSQASGRAID ADLAQSDPDI AAFINQERQR QETHLELIAS ENFASRAVMQ AQGSVLTNKY
AEGLPSKRYY GGCEHVDAIE ELAIERAKQL FGAAWANVQP HSGAQANFAV FLALLQPGDT
IMGLDLSHGG HLTHGSPVNV SGKWFNVVQY GVDKETQRLD MEAIRQLALE HKPKLIVCGY
SAYPRTIDFA AFRAIADEVG AYLLADMAHI AGLVAAGVHP SPVPHCDVVT TTTHKTLRGP
RGGLILCRDA EFAKKFDKAV FPGSQGGPLE HVIAAKAVAF GEALQPSFKA YSQQVVANAA
ALAEQLIARG IDVVSGGTDN HVVLLDLRSI GMTGKVADLL VSDVHITANK NTVPFDPESP
FVTSGLRFGT AALTTRGFDS QAFREVADVI ADRLFNPEDD AIRQRCLDRV GALCERFPLY
ADSKHKQPVL V
|
|---|
| |