| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0214 |
|---|
| Symbol | |
|---|
| ID | 3735722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 222030 |
|---|
| End bp | 223271 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637774794 |
|---|
| Product | putative pleiotropic regulatory protein |
|---|
| Protein accession | YP_380545 |
|---|
| Protein GI | 78211766 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.777207 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTTC CTCCCTTCAG CCTCAGCCAG CAGATCGACG ATCTCGGTGT GGACCTCGAA
GAGGCGGTGC TCGAGGTGTT GCGCAGCGGC CAGTACATCG GTGGACCGCA AATCAAACGC
TTCGAGGAGG CCTTTGCCGC CAGCGTTGGT TGCGAGCACG CCGTGGGCTG CAACAGCGGC
ACCGATGCAT TGATCCTTGC CCTGCGCGGC CTGGGGATCG GAGCATGCGA TGAGGTGATC
ACCTGCTCGT TCAGTTTTTT CGCCACAGCT GAGGCCATCA GCGCCGTCGG CGCCACGCCA
GTGTTCGTGG ATGTCGACCC CAGCACTTAC CTGATCGATT TTGATCAGAT CGAAGCCTCG
ATCACCCCCG CCACCAGGGC CCTGATGCCG GTGCACCTGT TTGGGCGTGC GGTGAACATG
ACCCGGCTAA TGGCCATTGC CGAACGCCAT CAGCTGAAGG TGATCGAAGA CTGCGCCCAG
GCGACGGGAG CCCGCTGGCA GGGCCAGGCG GTGGGCAGCT TCGGCGATGC AGGCTGCTTC
AGCTTCTTCC CCACCAAGAA CCTCGGTGCG GCGGGAGACG GCGGAGTTGT CACCACCAGC
GATGCAGGAC TGGCCCAGGC TATGCGCGAG CTCGCCGTGC ACGGCATGCC CGAGCGCTAC
CTGCACACCA GCCTTGGCTA CAACAGCCGA CTGGATGCAA TCCAGGCTGC GGTGCTGAAT
GTGAAGCTGC CAAAGCTGGA AGCGTGGATC AGCAAACGAA CCGCCATCGC TGAGCGCTAT
CGGGATGCCC TCGGTGATCT CAACGGACTC ACCCTGCCGA CAGCCGACGA CGGCCACAGC
TGGAATCAGT TCGTGGTGCG CATCGGCAGT TGCCCCAACG GCCAGCAGCT CTGCAACGCC
AGCTGCAATC CCTCCAGCAC CAGCGCACGC CACGGAATTC CGGAGAGCTG TTGCCGCGAC
TGGGTCAAGC AGACCCTGCA GGAGCATGGG GTGAGCACGA TCATTTACTA CCCGATTCCG
ATCCACCGCC AGCCGGCCTA CGCCCATCTG GGTTTGAAAC AGGGCTCCCT ACCGGTGACG
GAACAGCTCT GCAGCCAGGT GCTAAGCCTG CCGACCTTCC CTGAGTTGAG TGATACTCAG
CAACAAGCTG TGATCGACAC GGTGCGCCAG CTGATGGCAC CCAAGGTGCC GGCCCAGTTC
CGCCGGAGCG ATGAAGGCGA TCAGGACCGG ATGGTGGCGT AA
|
|---|
| Protein sequence | MQVPPFSLSQ QIDDLGVDLE EAVLEVLRSG QYIGGPQIKR FEEAFAASVG CEHAVGCNSG
TDALILALRG LGIGACDEVI TCSFSFFATA EAISAVGATP VFVDVDPSTY LIDFDQIEAS
ITPATRALMP VHLFGRAVNM TRLMAIAERH QLKVIEDCAQ ATGARWQGQA VGSFGDAGCF
SFFPTKNLGA AGDGGVVTTS DAGLAQAMRE LAVHGMPERY LHTSLGYNSR LDAIQAAVLN
VKLPKLEAWI SKRTAIAERY RDALGDLNGL TLPTADDGHS WNQFVVRIGS CPNGQQLCNA
SCNPSSTSAR HGIPESCCRD WVKQTLQEHG VSTIIYYPIP IHRQPAYAHL GLKQGSLPVT
EQLCSQVLSL PTFPELSDTQ QQAVIDTVRQ LMAPKVPAQF RRSDEGDQDR MVA
|
|---|
| |