Gene Syncc9605_0204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0204 
Symbol 
ID3736151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp211445 
End bp212185 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content59% 
IMG OID637774784 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_380535 
Protein GI78211756 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0271825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.278323 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGA ACACATCCCC CTCCATTGCT GCTGTTCGCG ATCTGCGCGA AGCCAGCTGC 
AGTCCGATTG GTGCCCCGAC GGTCACCAAC GACCTCAGCG AGAATGTCAT CCTCACCAGT
TTGGATGACC TGCACAACTG GGCTCGCTTA AGCAGTCTTT GGCCTCTCCT TTACGGAACA
GCCTGCTGCT TTATTGAATT CGCAGCGCTT CTTGGTTCCC GCTTCGATTT CGACCGCTTC
GGTCTGGTTC CCCGCAGTTC CCCGCGTCAG GCCGACCTTC TAATCGTGGC CGGCACCGTG
ACCATGAAGA TGGCACCCGC CCTGGTGCGG CTTTATGAGC AGATGCCTGA GCCGAAGTAC
GTGATCGCCA TGGGCGCTTG CACCATTACG GGTGGCATGT TCAGCGCTGA CTCCACCACC
GCAGTGCGCG GCGTCGACAA GTTGATTCCT GTTGATCTTT ATCTTCCCGG CTGTCCGCCT
CGCCCCGAGG CCATCTTTGA CGCCGTGATC AAGCTGCGCA AGAAAGTTGG CGATGAGTCG
CTGGCTGAGC GGCGCAAGCA TCAGCAGACC CATCGCTACG TGACGGTCTC TCACCAGATG
AAGCGTGTGG AGCCTGTGGT GAACGGTTCT TACCTTCGGG CTGAATCCCA GAAAGCAGCC
CTGGCTGCAG CGCCCGCTGG TCAGACGCTT GCCACCGATG CCGCCGTGCT TACCCCTGCT
GCTGAACCTC TCGAGTCATG A
 
Protein sequence
MSENTSPSIA AVRDLREASC SPIGAPTVTN DLSENVILTS LDDLHNWARL SSLWPLLYGT 
ACCFIEFAAL LGSRFDFDRF GLVPRSSPRQ ADLLIVAGTV TMKMAPALVR LYEQMPEPKY
VIAMGACTIT GGMFSADSTT AVRGVDKLIP VDLYLPGCPP RPEAIFDAVI KLRKKVGDES
LAERRKHQQT HRYVTVSHQM KRVEPVVNGS YLRAESQKAA LAAAPAGQTL ATDAAVLTPA
AEPLES