| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0187 |
|---|
| Symbol | |
|---|
| ID | 3736267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 195522 |
|---|
| End bp | 196556 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637774767 |
|---|
| Product | UDP-galactose 4-epimerase |
|---|
| Protein accession | YP_380518 |
|---|
| Protein GI | 78211739 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1087] UDP-glucose 4-epimerase |
|---|
| TIGRFAM ID | [TIGR01179] UDP-glucose-4-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.611091 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00729822 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCGAC GCGTCCTCAT CACCGGCGGT GCCGGCTTCA TCGGGAGTCA CACCTGTCTT
GTGCTGCTGG AGCAGGGCCA CGAGCTTGTG GTGCTGGACA ACTTCGACAA CAGCAGTCCT
GAGGCTTTGC GACGGGTGCA GGAGCTGGCG GGTTCAACCC AATTGACCCT GGTGGAGGGG
GATGTGCGCG ACCCCAGCGC TGTGGATCAG GCCTTCAGCT CCGGTGGAGC CGTGGATGGG
GTGATTCATT TCGCTGGGCT GAAAGCCGTA GGCGAATCGG TCGCCAACCC ACTCCGCTAC
TGGGATGTGA ATGTGAATGG CAGCCGCGTT CTGGCGGCGG CCATGGAGCG CCATGGTTGC
CGCACCCTGG TGTTCAGCAG CACCTCCACC GCCTACGGAG AGCCCGAAAC GTTCCCGCTG
AGGGAAGACA TGCCAACGGC ACCGGTGCAC CCCTATGCCC AGACCAAGGT GGCGGTGGAA
CAAATGCTGG CGGCCCTCTG CCGCTCGGGC TCGTGGCAGG TGGCCTGCCT GCGCTACTTC
AATCCAGTGG GTGCACACCC CAGCGGACGA ATCGGTGAAG ACCCGCTGGG AATTCCCAAC
AACCTCTTCC CCTTCATCAC ACAGGTGGCC GCAGAGCGTC GGGAGCGCTT GCGAATCTTC
GGTAACGACT ACCCCACGCC CGATGGCACC GGCATCCGTG ATTACCTGCA CGTGATGGAT
CTGGCTGAAG CCCATGGCTC GGCCCTTGAC CACTTGTTCA AGCGGCAAGC ATCGGATCCC
TTGACGCTGA ACATCGGCAC CGGCTGCGGA CTCAGCGTGC TGGACGTGGT GCACGGCTTC
GAACAGGCCA CAGGATTGGC CATCCCCTAC GAGATCGTGG AGCGTCGACC CGGCGACGTG
CCCCGCCTGG AGGCCTGCCC CCAGACCGCA CAGACCGTGC TGGGCTGGCG CGCCCGCCGA
AGCCTGGAAG AAATGTGCCG TGATGGCTGG GCCTGGCAGC AGGCCAATCC ATCCGGATAC
CGAGGCCCCA CATGA
|
|---|
| Protein sequence | MGRRVLITGG AGFIGSHTCL VLLEQGHELV VLDNFDNSSP EALRRVQELA GSTQLTLVEG
DVRDPSAVDQ AFSSGGAVDG VIHFAGLKAV GESVANPLRY WDVNVNGSRV LAAAMERHGC
RTLVFSSTST AYGEPETFPL REDMPTAPVH PYAQTKVAVE QMLAALCRSG SWQVACLRYF
NPVGAHPSGR IGEDPLGIPN NLFPFITQVA AERRERLRIF GNDYPTPDGT GIRDYLHVMD
LAEAHGSALD HLFKRQASDP LTLNIGTGCG LSVLDVVHGF EQATGLAIPY EIVERRPGDV
PRLEACPQTA QTVLGWRARR SLEEMCRDGW AWQQANPSGY RGPT
|
|---|
| |