| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0178 |
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| Symbol | |
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| ID | 3736258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 183158 |
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| End bp | 185548 |
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| Gene Length | 2391 bp |
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| Protein Length | 796 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637774758 |
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| Product | ATP-dependent DNA helicase Rep |
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| Protein accession | YP_380509 |
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| Protein GI | 78211730 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.349073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0817623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCT TGGCCGGCCT TAACGACGCC CAACGACGGG CGGTGGACCA TCACGAGGGG
CCGCTGCTGG TGGTGGCGGG AGCTGGCAGT GGTAAGACGC GCGCCCTCAC CCATCGGATC
GCTCACCTGA TCGGGGAGCA TGGTGCCGAT CCCGCTCAGA TCCTGGCGGT GACCTTCACC
AACAAAGCCG CCCGCGAGAT GAAGGAGCGG CTTGAGGTTC TTCTGGCACA ACGTCTGGCC
CAGAGCCAGT ACGGCCAGCC CTGGAGCACC CTGCCTCCAG TGGAGCAGCG CCAGCTGCGC
TCATGCATTT ACAGGGAGGT GACCAAGGAG CTGTGGATCG GCACCTTCCA TGCCCTGTTC
GCGCGGATGC TCCGCTACGA CATCGACAAG TTCAAAGACG CGGAAGGACT CACCTGGACC
AAGCAGTTTT CGATCTACGA CGAGGCCGAT GCCCAGAGCC TCGTGAAGGA GATCGTGACT
CAGGAGTTGC AGCTGGATCC CAAGCGGTTC GAGCCCAAAA AGACCCGCTG GGCCATCAGC
AATGCCAAGA ACCAGGGTTG GCTGCCGGAC CAGCTTGAAG CGAATGCGGA AGGCCAGCGG
GGCAAGCTCA CGGCCGATGT CTATCGGCGT TATCGCAAAG CGTTGGCGGC CAACAACGCC
TTGGATTTCG ACGATCTGTT GCTGCTGCCG GTTCAGTTGC TCCAGCAGAA CGATCAGGTG
CGCAGTTACT GGCACCGCCG CTTTCGCCAC GTGCTGGTGG ATGAATACCA GGACACCAAC
CGAACCCAGT ACGACCTGAT CAAACTGTTG GTCACCGATG GCAAGGATCC TCAGGATGTT
GAGGACTGGT CAGGCCGTTC CGTCTTTGTG GTCGGTGACG CCGACCAAAG CATCTATAGC
TTCCGTGCGG CTGACTTCAC GATCCTGATG GGGTTCCAGG ACGATTTCGG CGATCAGGCG
CCGGATGACT CCACTCAGAC GATGGTGAAG TTGGAGGAGA ACTACCGCTC CACCGCCACC
ATCCTCGAGG CGGCCAATGC CCTGATCGCC AACAACAGTG AACGGATCGA CAAGGTGCTC
CGTCCCACGC GAGGTGAGGG GGAGCTGATC ACCCTCACCC GCTGTGACGA CGAGATCGCC
GAGGCGGAAG CCGTGGTGCA CCGCATGCGC ACGATGGAAG CGGCCAACCC CGAGCTCAGC
TGGGGGGATA TGGCGGTGCT GTACCGCACC AATGCTCAGT CCCGGGCCAT TGAGGAATCC
CTGGTGCGCT GGGGGATCCC TTACATCGTG GTGGGGGGGC TGCGCTTCTA TGACCGGCGC
GAGATCAAGG ATCTGCTGGC CTATCTGCGG CTGTTGGTGA ATCCGGCTGA CACCGTCAGC
CTGCTGCGGG TGATCAACGT TCCGAAACGG GGCATCGGCA AGACCACGAT TCAGCGCCTC
ACCGATGCGG CCAATCAACT TGGGATTCCG CTGTGGGACG TGGTGAGTGA CCCCGAAGCG
GTGCGCTCCC TCGGCGGCCG TTCGGCCAAG GGTCTGCTCC AGTTTTGTGA CTTGGTTAAC
GATCTGAAAG CCCGCAGCCG TGACGTGGCC CCATCGGAAT TGATTCAGCA GGTGATGGAG
AAGAGCGGCT ATGTCAGTGA GTTGATTGCG GATGGCACCG ATGAAGCGGA GGAGCGACGC
CGCAACCTGC AGGAACTGGT GAATGCCGCT CTCCAGTATC AGGAGGAAAA CGACGAGGGT
TACCTGGAGG GATTCCTGGC CACGGCGGCC TTGTCTAGCG ATGCGGACAG TAAAGACACG
GCAGCCGATC GCGTCACCTT GATGACGCTC CATAGCAGCA AGGGACTGGA GTTCCCGGTG
GTGTGCCTGG TGGGTCTGGA GCAGGGCCTG TTCCCCAGCT ACCGCTCCCT GGATGATCCG
GCTTCACTGG AGGAAGAGCG TCGGCTTTGT TATGTGGGCA TCACTCGCGC GAAGGAACGG
CTGTTCATAT CCCACGCCTG TGAACGTCGT CTCTGGGGTG GCATGCGTGA AGCGGCTGTG
CCCTCTGTTT TCCTTTCGGA GCTGCCGGAG GCCCTGATCC AGGGCGACAT TCCGCAGACC
GGAGGGGCGG CGCTTCGGCG TGAACGGCGC CTGGACCGGC TCACGCGGGT GGACCGCGAC
AAGCCCTCAT CGGCCCCTGC CAATGCCGTG CGTCGCCGCC AGGCTGGCCC AGCTCCTGGC
CGCAGCTGGC AGGTCGGCGA TCGGGTCATC CACGCCAGCT TCGGGGTTGG CGAAATCACC
CACACCTTCG GCAGCGGCGA GAAGGTGTCG ATTGCGGTCA AGTTTGCGGG GATGGGCCCC
AAGATCCTTG ATCCGCGCCT GGCGCCGATT GAACCCGTGA CCACCGCTTA A
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| Protein sequence | MSFLAGLNDA QRRAVDHHEG PLLVVAGAGS GKTRALTHRI AHLIGEHGAD PAQILAVTFT
NKAAREMKER LEVLLAQRLA QSQYGQPWST LPPVEQRQLR SCIYREVTKE LWIGTFHALF
ARMLRYDIDK FKDAEGLTWT KQFSIYDEAD AQSLVKEIVT QELQLDPKRF EPKKTRWAIS
NAKNQGWLPD QLEANAEGQR GKLTADVYRR YRKALAANNA LDFDDLLLLP VQLLQQNDQV
RSYWHRRFRH VLVDEYQDTN RTQYDLIKLL VTDGKDPQDV EDWSGRSVFV VGDADQSIYS
FRAADFTILM GFQDDFGDQA PDDSTQTMVK LEENYRSTAT ILEAANALIA NNSERIDKVL
RPTRGEGELI TLTRCDDEIA EAEAVVHRMR TMEAANPELS WGDMAVLYRT NAQSRAIEES
LVRWGIPYIV VGGLRFYDRR EIKDLLAYLR LLVNPADTVS LLRVINVPKR GIGKTTIQRL
TDAANQLGIP LWDVVSDPEA VRSLGGRSAK GLLQFCDLVN DLKARSRDVA PSELIQQVME
KSGYVSELIA DGTDEAEERR RNLQELVNAA LQYQEENDEG YLEGFLATAA LSSDADSKDT
AADRVTLMTL HSSKGLEFPV VCLVGLEQGL FPSYRSLDDP ASLEEERRLC YVGITRAKER
LFISHACERR LWGGMREAAV PSVFLSELPE ALIQGDIPQT GGAALRRERR LDRLTRVDRD
KPSSAPANAV RRRQAGPAPG RSWQVGDRVI HASFGVGEIT HTFGSGEKVS IAVKFAGMGP
KILDPRLAPI EPVTTA
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