Gene Syncc9605_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0172 
Symbol 
ID3736252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp177640 
End bp178764 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content62% 
IMG OID637774752 
Productglycosyl transferase, group 1 
Protein accessionYP_380503 
Protein GI78211724 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0363337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.131519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTC GTGTCCTGGT ATTGGCCCCG ACCCGGCGGG CGCGGACGGA AACCTTTGTG 
CGCGCCAATC TGGCCCGCTT GCCCTTTGCG GTGGAGGCCT GTTTCGGGGA TGAGATGCCT
TGGCGCGAGC CCCTCAAAGC GCTCTATGGC CTGGCGGTGC TGACCAGCAA AGTCTGCACC
CGCTTGGGCT GGCTTCGGCT GGCCACACTT CCCACTTCAA TCGTGGCCAT GCTTTTGGTG
AAACGCCACC GACCGGATGT GGTGATGGTG GAGTTCGGTT TCCATGCCGT CAGGGTGATG
GAGCTGGCTC GTCTGGGAGT TCCCTTGGCG GTTCACTTTC GCGGCGCTGA TGCCTCAGCG
GAGCGCTACT TGAAGCGCCT TGAGCCGCGC TACCGCCGTT TGTTTCAGCT CACCTCGGCT
GTGATCGTCA AGAACCAAAC GATGCGGAGC CGATTGATCT CCCTCGGAGC CCAGCCGGCA
CAGCTCGTGA TCAGTCCATC CGGTGCCGAT GAGCAGCGGT TTCAGGGAGC CACTCCCGCA
TCCATGCCTC CGCGGTTTCT GGCGGTGGGA CGCTTTGTGG CCAAAAAAGG CCCGCTGGAC
ACCCTGGAGG CTTTTGCTCT CCTGCAAGGC CTTACGGACC ATGCTGATGC CTGCAGCCTG
GTGATGGTGG GTGATGGACC TCTCCTTTCC GTCGTGCAGG ACAGGGCTCA CCAGCTGGGA
CTTGAGCATC TTGTTCAGTT CCCAGGCGTG CTTTCGCCGG ATGCAGTGGT GCAGGAGATG
AGGCGTGCAC GGGTGTTTGT GCAGCATTCC CGCACAGCGG AAGATGGTGA TGAGGAGGGA
TGCCCTGTCT CCGTGATGGA AGCCCAGCTT TGTGGTCTGC CCGTTGTGGC GACCCGTCAT
GGCGGGATTC CAGATGTGGT TGTGGATCAA CAGACCGGAA GGCTGGTGGA GGAAGGCGAC
CGTTGGGGGA TGGCGGAGGC CATGGCCTTG CTGGCTGATC GTCCGGGACT TGCCGCTGCT
TGGGGGGCTG CCGGTCAACG TCGGACCCAG GCACGATTCA CCGTGAAGCA CCACGTGGAT
CAGATCACCA TGCTGCTCAA CGATCTGGTG GAGCACAGAG CATGA
 
Protein sequence
MTARVLVLAP TRRARTETFV RANLARLPFA VEACFGDEMP WREPLKALYG LAVLTSKVCT 
RLGWLRLATL PTSIVAMLLV KRHRPDVVMV EFGFHAVRVM ELARLGVPLA VHFRGADASA
ERYLKRLEPR YRRLFQLTSA VIVKNQTMRS RLISLGAQPA QLVISPSGAD EQRFQGATPA
SMPPRFLAVG RFVAKKGPLD TLEAFALLQG LTDHADACSL VMVGDGPLLS VVQDRAHQLG
LEHLVQFPGV LSPDAVVQEM RRARVFVQHS RTAEDGDEEG CPVSVMEAQL CGLPVVATRH
GGIPDVVVDQ QTGRLVEEGD RWGMAEAMAL LADRPGLAAA WGAAGQRRTQ ARFTVKHHVD
QITMLLNDLV EHRA