Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0172 |
Symbol | |
ID | 3736252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 177640 |
End bp | 178764 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637774752 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_380503 |
Protein GI | 78211724 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0363337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.131519 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTC GTGTCCTGGT ATTGGCCCCG ACCCGGCGGG CGCGGACGGA AACCTTTGTG CGCGCCAATC TGGCCCGCTT GCCCTTTGCG GTGGAGGCCT GTTTCGGGGA TGAGATGCCT TGGCGCGAGC CCCTCAAAGC GCTCTATGGC CTGGCGGTGC TGACCAGCAA AGTCTGCACC CGCTTGGGCT GGCTTCGGCT GGCCACACTT CCCACTTCAA TCGTGGCCAT GCTTTTGGTG AAACGCCACC GACCGGATGT GGTGATGGTG GAGTTCGGTT TCCATGCCGT CAGGGTGATG GAGCTGGCTC GTCTGGGAGT TCCCTTGGCG GTTCACTTTC GCGGCGCTGA TGCCTCAGCG GAGCGCTACT TGAAGCGCCT TGAGCCGCGC TACCGCCGTT TGTTTCAGCT CACCTCGGCT GTGATCGTCA AGAACCAAAC GATGCGGAGC CGATTGATCT CCCTCGGAGC CCAGCCGGCA CAGCTCGTGA TCAGTCCATC CGGTGCCGAT GAGCAGCGGT TTCAGGGAGC CACTCCCGCA TCCATGCCTC CGCGGTTTCT GGCGGTGGGA CGCTTTGTGG CCAAAAAAGG CCCGCTGGAC ACCCTGGAGG CTTTTGCTCT CCTGCAAGGC CTTACGGACC ATGCTGATGC CTGCAGCCTG GTGATGGTGG GTGATGGACC TCTCCTTTCC GTCGTGCAGG ACAGGGCTCA CCAGCTGGGA CTTGAGCATC TTGTTCAGTT CCCAGGCGTG CTTTCGCCGG ATGCAGTGGT GCAGGAGATG AGGCGTGCAC GGGTGTTTGT GCAGCATTCC CGCACAGCGG AAGATGGTGA TGAGGAGGGA TGCCCTGTCT CCGTGATGGA AGCCCAGCTT TGTGGTCTGC CCGTTGTGGC GACCCGTCAT GGCGGGATTC CAGATGTGGT TGTGGATCAA CAGACCGGAA GGCTGGTGGA GGAAGGCGAC CGTTGGGGGA TGGCGGAGGC CATGGCCTTG CTGGCTGATC GTCCGGGACT TGCCGCTGCT TGGGGGGCTG CCGGTCAACG TCGGACCCAG GCACGATTCA CCGTGAAGCA CCACGTGGAT CAGATCACCA TGCTGCTCAA CGATCTGGTG GAGCACAGAG CATGA
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Protein sequence | MTARVLVLAP TRRARTETFV RANLARLPFA VEACFGDEMP WREPLKALYG LAVLTSKVCT RLGWLRLATL PTSIVAMLLV KRHRPDVVMV EFGFHAVRVM ELARLGVPLA VHFRGADASA ERYLKRLEPR YRRLFQLTSA VIVKNQTMRS RLISLGAQPA QLVISPSGAD EQRFQGATPA SMPPRFLAVG RFVAKKGPLD TLEAFALLQG LTDHADACSL VMVGDGPLLS VVQDRAHQLG LEHLVQFPGV LSPDAVVQEM RRARVFVQHS RTAEDGDEEG CPVSVMEAQL CGLPVVATRH GGIPDVVVDQ QTGRLVEEGD RWGMAEAMAL LADRPGLAAA WGAAGQRRTQ ARFTVKHHVD QITMLLNDLV EHRA
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