Gene Syncc9605_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0163 
Symbol 
ID3735772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp166756 
End bp167943 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content64% 
IMG OID637774743 
Producthypothetical protein 
Protein accessionYP_380494 
Protein GI78211715 
COG category[S] Function unknown 
COG ID[COG3394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0658959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCT ACGGCCTGGT GGGTGGCACT GCCGCAGCCG TCCACATCGG CGTACTGCTG 
CTGCTGGGCC AGTGGATGAG CCTGAGCCTG GCCAATCCCA TTGCCTTTCT GGCCGCCTCC
GTCGCGGGAT ATCTCGGCCA TGCACTGCTG ACGTTCCGAG AAGAGACCGG CGGACGCCAG
TTCGCCCGTC GCTGGCTGCT GCTGCAATAC GTGGTCAACA TCAGTGTCTG TGCCCTGCTG
CCACTGCTCC AGGCCCCGAC CCTGGTGCTG GTGTTCACAC CCACGCTGCT CAACGCCCTG
ATCTGGAGCC GAGCGGCTCG CTTCAGTGCT CAGGCCCGCC AGCACCAGCA GGGGCATCCA
CCGCTGCTCC ATGCCGACGA CCTCGGCCTG GCGGAGGGCG TCGATGCGGC CATCCTCGAT
CTGGCCCAAA GCAGGCGGCT TCAGGGGGCC AGTCTTCTGG TGAATGGTCC CAGTGCGACC
GCCGCCATGC AGGCGTGGCA TGACCTTGCC GACCCACCAC CGCTCAGCCT GCATGTCTGT
CTCACCGAGG GGTATCGCCT ACCAAACTGC CCAGAGATCC CAACCGGATT CGGGACCTTG
CTGCTGGCCT CCCTCCTGCC ATGGCAACGG CGGCGCATCG CCCCCCAGTT GCACACGGTT
TTGCTGCAGC AAATCAGCCG CTACCGCCAG CTCACGGGGC TGCAACACAT CCGGCTCGAT
GGCCACCAAC ACATCCATTT GGTTCCGCTT GTGCTGGATG CGGTGCTGGA TCTGGCCAGC
GACGAATCAA TCACCTGGGT GCGTACGACG CGAGAGCCCC TGCCGGAAGG CCTGCCATTG
AGGCTCTGGT GGCGCAGCCT GCAGAGCGTA GGTCTGCTCA AGTGGCTGGT TCTGCAACTG
CTGAGCGGGC TGGCCATCCC GCGCCTGCGC CGGGCCGGAC TTCAAACCAA CCGGCGCTTC
GCCGGAGTGC TGTTCAGTGG ATCAATGTTC GGAACTGCCT TTCGCCGCTG CTGGGAAACG
GCCTACAGCT CAATCACTGA GGAGCGTGCT GCGCAGCCGG TTGTTCTGAT CCACCCAGCC
CTCCCCAATG CTGCGTCGGG AATGGATCAG GCGGCGTTTC AGCAGTCTGT GGCTTTTTTC
AGTTCCACCA ACCGCCAGAA AGAGTGGAGC TCAGCGCAAC AGCTTTGA
 
Protein sequence
MLRYGLVGGT AAAVHIGVLL LLGQWMSLSL ANPIAFLAAS VAGYLGHALL TFREETGGRQ 
FARRWLLLQY VVNISVCALL PLLQAPTLVL VFTPTLLNAL IWSRAARFSA QARQHQQGHP
PLLHADDLGL AEGVDAAILD LAQSRRLQGA SLLVNGPSAT AAMQAWHDLA DPPPLSLHVC
LTEGYRLPNC PEIPTGFGTL LLASLLPWQR RRIAPQLHTV LLQQISRYRQ LTGLQHIRLD
GHQHIHLVPL VLDAVLDLAS DESITWVRTT REPLPEGLPL RLWWRSLQSV GLLKWLVLQL
LSGLAIPRLR RAGLQTNRRF AGVLFSGSMF GTAFRRCWET AYSSITEERA AQPVVLIHPA
LPNAASGMDQ AAFQQSVAFF SSTNRQKEWS SAQQL