Gene Syncc9605_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0162 
Symbol 
ID3735771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp165823 
End bp166773 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content61% 
IMG OID637774742 
Productputative glycosyl transferase family protein 
Protein accessionYP_380493 
Protein GI78211714 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0638149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGCG AGCAGGTATG GGTGGTGGCG GCCTGCTTCA ACGAAGCCGA GGTGATCAGC 
GCCTTCATTG AGCGTGTGTT GGCCTTGCCG GAGGTGGACC ATCTGCTGCT GATTGATGAC
GGTTCCTCCG ATGCCACGGT TGCTGTGATC CGTGCCTGGC AGCAGAGCCA TGCCAATCCT
GCCGTCACGC TGTTGGAGCT CACCCGCAAC TTCGGCAAGG AGGCCGCGAT GCTGGCGGGG
TTGGACTACG CCAATGGCCG CTGTGCCGCT GCGGTGCTGA TCGATTCCGA CCTGCAGCAC
CCGCCGGAGC GGATTCCCGC CATGGTCCAG GCCTGGCGAA ACGGGGCTGA GGTGGTGACC
GCGGTGAGGG ACGACCGCGA TGCCGAAGGG CTCGTCAAGG TGGCCACGGC ATCTTGGTTC
TATCGGGTGT TCAACCGCTT GGTCGATTCG ATCCAGCTTC AGGAAGGGGC TGGCGACTTT
CGGCTCTTGA GTGCTCCAGT GGTGGAGGCG GTGACCCAGT TGCGTGAGGC CACGCGCTTC
TCCAAAGGCT TGATGCCCTG GACCGGTTAC CGCAGCGAGG AGATCGCATA CAGCCGGGTG
GCCCGCGTCG GTGGCACCAC CTCTTGGAGT TCCCTCAAGC TCTGGCGCTA TGCCCTAGAC
GGCATTTTTT CTTTCACGGT CAAGCCCCTG AAGGTGTGGG GCGTGATCGG TGTGCTGATT
TCATTCCTGA GCTTTGTCTA TGCCGCCCTG ATCGTGTTGC GTACCTTGGT CTTCGGTATT
GACCTGCCGG GCTACGCCTC ACTGATCGTG GCTGTTCTGT TCCTTGGGGG AATACAGCTG
ATTGGCATCG GCGTGCTGGG CGAGTACATC GGTCGGATCT ACATCGATGT GAAACAGCGT
CCGCACTATT TCGTTAGAGC TGTGCATCAG GGCTCAAAGC TGTTGCGCTG A
 
Protein sequence
MASEQVWVVA ACFNEAEVIS AFIERVLALP EVDHLLLIDD GSSDATVAVI RAWQQSHANP 
AVTLLELTRN FGKEAAMLAG LDYANGRCAA AVLIDSDLQH PPERIPAMVQ AWRNGAEVVT
AVRDDRDAEG LVKVATASWF YRVFNRLVDS IQLQEGAGDF RLLSAPVVEA VTQLREATRF
SKGLMPWTGY RSEEIAYSRV ARVGGTTSWS SLKLWRYALD GIFSFTVKPL KVWGVIGVLI
SFLSFVYAAL IVLRTLVFGI DLPGYASLIV AVLFLGGIQL IGIGVLGEYI GRIYIDVKQR
PHYFVRAVHQ GSKLLR