Gene Syncc9605_0139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0139 
Symbol 
ID3737324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp135673 
End bp136521 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content61% 
IMG OID637774718 
Product2-dehydro-3-deoxyphosphooctonate aldolase 
Protein accessionYP_380470 
Protein GI78211691 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 
TIGRFAM ID[TIGR01362] 3-deoxy-8-phosphooctulonate synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00402805 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0144147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCATC AGATCCAACT GGGAGATATC ACCTTCGCGA ACGACCGCCC CTTCGCCCTG 
CTGGGTGGTG TGAACGTTCT CGAGGATCTC GACTTCGCCC TGCGTTGCGC CGGCCACTAC
AAAAACGTCT GCGGAAGGCT GAACATCCCA TTGGTGTTCA AGGCGTCGTA CGACAAGGCC
AACCGCTCCT CCATTCATTC CTTCCGTGGC CCCGGCCTCA ACGAAGGGCT GCAGATCCTC
CAGGCGGTGA AGGACACCCA TGGCATTCCG GTGATTACGG ATGTGCACAG CCCTGAAGAG
GCCGCTGCCG CAGCCAAGGT CGCCGACATC ATCCAGCTGC CGGCTTTTCT GGCCAGGCAG
ACCGATCTGG TCCGTGCCAT GGCGGAAACC GGTGCGATGA TCAACGTCAA GAAGCCACAG
TTCCTGAGTC CGGAACAGAT GCGCAACATC GTGGACAAAT TCCGCGAATG CGGGAACGAG
AACCTGCTGC TGTGTGAGCG GGGCACCAAC TTCGGTTACG ACAATCTCGT GGTGGACATG
CTGGGGTTCG GCGTGATGAA ACGCACCTGC GATGACCTTC CGCTGATCTT CGATGTCACC
CACGCCCTGC AGTGCAGGGA TCCAGGTGGT GCTGCCTCCG GCGGACGTCG CAGCCAGGTG
GTGGACCTAG CCCGCTCTGG CATGGCGGTT GGCCTGGCTG GTTTGTTCCT GGAAGCACAC
CCAGACCCGG CGCGAGCCCG TTGCGACGGC CCCAGCGCCT TACCCCTTGA TCAGCTGGAA
CCTTTTCTCA CGCAGGTGAA AGCCATCGAT GATCTGGTGA AGGCCATGCC AGACCTGCAG
ATCAACTGA
 
Protein sequence
MAHQIQLGDI TFANDRPFAL LGGVNVLEDL DFALRCAGHY KNVCGRLNIP LVFKASYDKA 
NRSSIHSFRG PGLNEGLQIL QAVKDTHGIP VITDVHSPEE AAAAAKVADI IQLPAFLARQ
TDLVRAMAET GAMINVKKPQ FLSPEQMRNI VDKFRECGNE NLLLCERGTN FGYDNLVVDM
LGFGVMKRTC DDLPLIFDVT HALQCRDPGG AASGGRRSQV VDLARSGMAV GLAGLFLEAH
PDPARARCDG PSALPLDQLE PFLTQVKAID DLVKAMPDLQ IN