Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0139 |
Symbol | |
ID | 3737324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 135673 |
End bp | 136521 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637774718 |
Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
Protein accession | YP_380470 |
Protein GI | 78211691 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00402805 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0144147 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCATC AGATCCAACT GGGAGATATC ACCTTCGCGA ACGACCGCCC CTTCGCCCTG CTGGGTGGTG TGAACGTTCT CGAGGATCTC GACTTCGCCC TGCGTTGCGC CGGCCACTAC AAAAACGTCT GCGGAAGGCT GAACATCCCA TTGGTGTTCA AGGCGTCGTA CGACAAGGCC AACCGCTCCT CCATTCATTC CTTCCGTGGC CCCGGCCTCA ACGAAGGGCT GCAGATCCTC CAGGCGGTGA AGGACACCCA TGGCATTCCG GTGATTACGG ATGTGCACAG CCCTGAAGAG GCCGCTGCCG CAGCCAAGGT CGCCGACATC ATCCAGCTGC CGGCTTTTCT GGCCAGGCAG ACCGATCTGG TCCGTGCCAT GGCGGAAACC GGTGCGATGA TCAACGTCAA GAAGCCACAG TTCCTGAGTC CGGAACAGAT GCGCAACATC GTGGACAAAT TCCGCGAATG CGGGAACGAG AACCTGCTGC TGTGTGAGCG GGGCACCAAC TTCGGTTACG ACAATCTCGT GGTGGACATG CTGGGGTTCG GCGTGATGAA ACGCACCTGC GATGACCTTC CGCTGATCTT CGATGTCACC CACGCCCTGC AGTGCAGGGA TCCAGGTGGT GCTGCCTCCG GCGGACGTCG CAGCCAGGTG GTGGACCTAG CCCGCTCTGG CATGGCGGTT GGCCTGGCTG GTTTGTTCCT GGAAGCACAC CCAGACCCGG CGCGAGCCCG TTGCGACGGC CCCAGCGCCT TACCCCTTGA TCAGCTGGAA CCTTTTCTCA CGCAGGTGAA AGCCATCGAT GATCTGGTGA AGGCCATGCC AGACCTGCAG ATCAACTGA
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Protein sequence | MAHQIQLGDI TFANDRPFAL LGGVNVLEDL DFALRCAGHY KNVCGRLNIP LVFKASYDKA NRSSIHSFRG PGLNEGLQIL QAVKDTHGIP VITDVHSPEE AAAAAKVADI IQLPAFLARQ TDLVRAMAET GAMINVKKPQ FLSPEQMRNI VDKFRECGNE NLLLCERGTN FGYDNLVVDM LGFGVMKRTC DDLPLIFDVT HALQCRDPGG AASGGRRSQV VDLARSGMAV GLAGLFLEAH PDPARARCDG PSALPLDQLE PFLTQVKAID DLVKAMPDLQ IN
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