Gene Syncc9605_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0086 
SymbolmiaA 
ID3736336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp87640 
End bp88539 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content66% 
IMG OID637774668 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionYP_380420 
Protein GI78211641 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase 
TIGRFAM ID[TIGR00174] tRNA isopentenyltransferase (miaA) 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACAGCT CCAACCCCCT GGTGATCACC CTGCTCGGGC CCACCGCCAG CGGCAAGACC 
GCCCTGGCGT TGGACATCGC CGAACGGCTG GATCTGCCGG TGTTCAACGT GGATTCCCGC
CAGCTCTACA GGGAGATGGA CATCGGAACC GCTAAGCCGA CGGCGGAGCA ACAGGCGCGG
ATACCGCACC ATCTGCTGGA CCTGCGCACG CCCGATCAGC CGATCACGCT GCAGGAATTT
CAGGCGATCG CCACCCCCTG CATCAACGCT GCTCTAGAGC AGCGGGACGT GGCGCTGCTG
GTGGGCGGCA GCGGCCTCTA TCTCAAGGCC CTCACCAGCG GTCTTCAGCC TCCTGCCGTG
GCACCCCAGC CGCAACTGCG CCAGCAGCTG ACGGCCCTGG GCCAGCAGAT CTGCCATCCC
CTGCTGCAGG CCGCCGACCC CAAGGCCGCT GCCAAAATCG CCCCTGCCGA TGCCGTGCGC
ACCCAACGCG CCCTTGAGGT GCTCTACGGC TCCGGGCAAC CGATGAGCCG GCAGGCCACA
GCCGCCCCTC CGCCCTGGCG GGTGCTGGAA CTGGGCCTCA ACCCCGCCAA CCTGCGCCAA
CGCATCCAGC AACGTACCGA GCAGCTCTAC CGCGATGGGC TGGTGGACGA GACCCAGCGC
CTGAGCGAGC GCTACGGCGC TGATCTGCCA TTGCTGCAGA CCATCGGCTA CAGCGAAGCG
CTGCAGATGA TTGGCGGCAG CCTGACCACA ACAGAAGCGG TGCGAATCAC CAGCCAACGC
ACCCGCCAGT TCGCCAAACG CCAACGCACC TGGTTCCGGC GTCAGCACAA CCCCCACTGG
CTGCCCGACC AGGCAACGCT GACGGATGCG ATGACGTTGA TCGAACAACA TCTAAGGTGA
 
Protein sequence
MNSSNPLVIT LLGPTASGKT ALALDIAERL DLPVFNVDSR QLYREMDIGT AKPTAEQQAR 
IPHHLLDLRT PDQPITLQEF QAIATPCINA ALEQRDVALL VGGSGLYLKA LTSGLQPPAV
APQPQLRQQL TALGQQICHP LLQAADPKAA AKIAPADAVR TQRALEVLYG SGQPMSRQAT
AAPPPWRVLE LGLNPANLRQ RIQQRTEQLY RDGLVDETQR LSERYGADLP LLQTIGYSEA
LQMIGGSLTT TEAVRITSQR TRQFAKRQRT WFRRQHNPHW LPDQATLTDA MTLIEQHLR