Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0086 |
Symbol | miaA |
ID | 3736336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 87640 |
End bp | 88539 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637774668 |
Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
Protein accession | YP_380420 |
Protein GI | 78211641 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACAGCT CCAACCCCCT GGTGATCACC CTGCTCGGGC CCACCGCCAG CGGCAAGACC GCCCTGGCGT TGGACATCGC CGAACGGCTG GATCTGCCGG TGTTCAACGT GGATTCCCGC CAGCTCTACA GGGAGATGGA CATCGGAACC GCTAAGCCGA CGGCGGAGCA ACAGGCGCGG ATACCGCACC ATCTGCTGGA CCTGCGCACG CCCGATCAGC CGATCACGCT GCAGGAATTT CAGGCGATCG CCACCCCCTG CATCAACGCT GCTCTAGAGC AGCGGGACGT GGCGCTGCTG GTGGGCGGCA GCGGCCTCTA TCTCAAGGCC CTCACCAGCG GTCTTCAGCC TCCTGCCGTG GCACCCCAGC CGCAACTGCG CCAGCAGCTG ACGGCCCTGG GCCAGCAGAT CTGCCATCCC CTGCTGCAGG CCGCCGACCC CAAGGCCGCT GCCAAAATCG CCCCTGCCGA TGCCGTGCGC ACCCAACGCG CCCTTGAGGT GCTCTACGGC TCCGGGCAAC CGATGAGCCG GCAGGCCACA GCCGCCCCTC CGCCCTGGCG GGTGCTGGAA CTGGGCCTCA ACCCCGCCAA CCTGCGCCAA CGCATCCAGC AACGTACCGA GCAGCTCTAC CGCGATGGGC TGGTGGACGA GACCCAGCGC CTGAGCGAGC GCTACGGCGC TGATCTGCCA TTGCTGCAGA CCATCGGCTA CAGCGAAGCG CTGCAGATGA TTGGCGGCAG CCTGACCACA ACAGAAGCGG TGCGAATCAC CAGCCAACGC ACCCGCCAGT TCGCCAAACG CCAACGCACC TGGTTCCGGC GTCAGCACAA CCCCCACTGG CTGCCCGACC AGGCAACGCT GACGGATGCG ATGACGTTGA TCGAACAACA TCTAAGGTGA
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Protein sequence | MNSSNPLVIT LLGPTASGKT ALALDIAERL DLPVFNVDSR QLYREMDIGT AKPTAEQQAR IPHHLLDLRT PDQPITLQEF QAIATPCINA ALEQRDVALL VGGSGLYLKA LTSGLQPPAV APQPQLRQQL TALGQQICHP LLQAADPKAA AKIAPADAVR TQRALEVLYG SGQPMSRQAT AAPPPWRVLE LGLNPANLRQ RIQQRTEQLY RDGLVDETQR LSERYGADLP LLQTIGYSEA LQMIGGSLTT TEAVRITSQR TRQFAKRQRT WFRRQHNPHW LPDQATLTDA MTLIEQHLR
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