Gene Syncc9605_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0081 
SymbolsecA 
ID3736331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp81186 
End bp83990 
Gene Length2805 bp 
Protein Length934 aa 
Translation table11 
GC content59% 
IMG OID637774663 
Productpreprotein translocase subunit SecA 
Protein accessionYP_380415 
Protein GI78211636 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) 
TIGRFAM ID[TIGR00963] preprotein translocase, SecA subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGC TCCTGCTGGG TGATCCCAAT GCCCGCAAGC TGAAGCGTTA CCAGCCGATC 
GTTTCGGATA TTCAGCTGCT TGAAGAGGAG ATCGCTCCGC TCTCCGACGA TGAGTTACGT
GGCAGAACCG CTGCCTTCCA GGAGCGTTTG GCCAATGCCG GCAGTCTGGC GAACCAGCGG
CCGATCCTCG ACGAGATCCT GCCTGAGGCC TTTGCCGTTG TTCGTGAAGC CGGCAAGCGG
GTGCTGGGCA TGCGTCATTT CGATGTCCAG CTGATTGGCG GCATGGTGCT GCATGAAGGC
CAGATCGCCG AGATGAAAAC TGGCGAAGGC AAAACTCTGG TTGCCACCCT TCCGAGCTAC
CTCAACGCCC TCACTGGTCG TGGCGTGCAC GTCGTGACGG TGAACGATTA CCTGGCCCGC
CGTGATGCCG AGTGGATGGG CCAGGTGCAT CGCTTCCTCG GTTTATCCGT GGGCCTGATC
CAGCAGGACA TGCGTCCTGA GGAGCGCCGA CGTAACTACA ACTGCGATAT CACCTACGCC
ACCAATTCAG AGCTGGGCTT CGATTACCTG CGCGACAACA TGGCTGCCGA CATCTCGGAG
GTGGTGCAGC GGGAGTTTCA GTACTGCGTG ATCGATGAGG TCGATTCGAT CCTGATCGAC
GAAGCCCGCA CCCCTCTGAT CATTTCTGGT CAGGTGGAAC GGCCCCAGGA GAAGTACCAG
CAGGCGGCCG AGGTGGCCAA TGCCCTTGCT CGCGCTGCCG AGTTAAGCAA AGACGGCATC
GATCCCGAGG GGGATTACGA GGTGGATGAA AAGCAGCGCA GCTGCACCCT CACCGATGAA
GGCTTTGCCA AGGCCGAGCA GATGCTCGGG GTGGCTGATC TGTTCAACCC CCAGGACCCC
TGGGCCCACT ACATCACCAA CGCTCTGAAG GCCAAGGAGC TGTTCGTCAA GGATGTGAAC
TACATCGTGC GCGATGGCGA AGCGGTGATC GTGGATGAGT TCACCGGTCG GGTGATGCCT
GGGCGCCGTT GGAGTGACGG CCAGCACCAA GCCATTGAGG CCAAGGAGGC CCTTGCGATC
CAATCAGAAA CGCAGACCCT CGCTTCGATC ACGTATCAGA ACTTTTTCCT GCTCTATCCC
CGCTTGGCCG GCATGACCGG CACGGCCAAA ACGGAAGAGG TTGAATTCGA GAAGACCTAC
AAACTCGAAA CCACAATCGT CCCCACCAAC CGGGTCCGGG CGCGTCAGGA CTGGGCCGAT
CAGGTTTACA AAACCGAGGC TGCAAAATGG CGCGCTGTGG CCAACGAAAC AGCTGAGATC
CACAAGAACG GACGGCCGGT GCTAGTCGGC ACCACCTCGG TGGAGAAAAG CGAACTGCTG
AGTTCGCTGC TGGCGGAGCA GGAGATCCCC CACAACCTGC TCAACGCGAA GCCGGAGAAT
GTGGAGCGCG AATCGGAGAT CGTCGCCCAG GCGGGTCGGG CTGGCGCTGT GACCATCGCC
ACCAACATGG CGGGCCGTGG TACTGACATC ATCCTTGGTG GCAACAGCGA CTACATGGCC
CGCTTGAAGT TGCGGGAGGT GCTGCTGGGC CGTCTTGTGA AGCCGGAAGA GGATCACACG
CCGCCCGTGC CTTTGCAGCG CAGTGCTCCG GGCGGGTTCT CTGATGCTGC GGCGCCTTCG
CTGCCCCGCA GCGGCGAGAG CCTCTATCCC TGCCCCCTCA CCGATGACAC CGATCAAGCC
CTCGGCCAGC TGGCGCGTGA TCTGGTCAAG GCCTGGGGCG ATCGTGCCCT CACGGTGATT
GAGCTGGAGG AGCGCATCGC CACTGCTGCG GAGAAAGCAC CCACTGAGGC TCCCCAGATT
CAGGCATTGC GCGAGGCGAT CGCCCGGGTG AAGGGTGAAT ACGACGCCGT GGTAAAGCAG
GAAGAAAGCC GCGTTCGCGA GGCTGGCGGC CTGCATGTGA TCGGCACGGA ACGGCATGAG
TCCCGCCGTG TCGATAACCA ACTTCGTGGC CGTGCCGGCC GCCAGGGCGA CCCCGGATCC
ACTCGCTTTT TCCTCTCATT GGGCGACAAC TTGCTGCGGA TCTTCGGCGG TGATCGCGTT
GCCGGTCTGA TGAATGCCTT CCGCGTGGAG GAAGACATGC CGATTGAATC CGGCATGCTC
ACCCGTTCGC TGGAGGGAGC TCAGAAGAAG GTGGAGACCT ACTACTACGA CATCCGCAAG
CAGGTGTTCG AGTACGACGA GGTGATGAAC AACCAGCGGC GTGCGGTGTA TTCCGAACGC
CGCCGAGTGC TGGATGGCCG TGCTTTGAAG AAGCAAGTGA TCGGTTACGG CGAACGCACC
ATGGGAGAAA TCGTGGAGGC CTATGTGAAT CCTGACCTGC CGCCGGAGGA ATGGGATCTC
GATCAGCTGG TCGGCAAGGT GAAAGAGTTC ATCTATTTGT TGGAAGATCT CACCCCTGAC
CAGGTTCAGG GCCTCGGCAT GGAGGAACTC AAGGCCTTTC TTCAGGAGCA ACTACGCAAT
GCCTATGACC TCAAAGAAGG CCAGATTGAG CAACAGCGCC CTGGGCTGAT GCGTGAGGCT
GAGCGCTTCT TCATCCTTCA GCAGATTGAT ACCCTTTGGC GTGAACATCT CCAGGCGATG
GATGCCCTGC GTGAATCGGT GGGTCTGCGT GGCTACGGTC AGAAAGATCC GCTCATTGAA
TACAAGAATG AGGGTTACGA CATGTTCCTT GAAATGATGA CGAATATGCG CCGTAATGTC
ATCTATTCAA TGTTCATGTT CCAGCCGCAA GCACCCAAAA ACTAG
 
Protein sequence
MLKLLLGDPN ARKLKRYQPI VSDIQLLEEE IAPLSDDELR GRTAAFQERL ANAGSLANQR 
PILDEILPEA FAVVREAGKR VLGMRHFDVQ LIGGMVLHEG QIAEMKTGEG KTLVATLPSY
LNALTGRGVH VVTVNDYLAR RDAEWMGQVH RFLGLSVGLI QQDMRPEERR RNYNCDITYA
TNSELGFDYL RDNMAADISE VVQREFQYCV IDEVDSILID EARTPLIISG QVERPQEKYQ
QAAEVANALA RAAELSKDGI DPEGDYEVDE KQRSCTLTDE GFAKAEQMLG VADLFNPQDP
WAHYITNALK AKELFVKDVN YIVRDGEAVI VDEFTGRVMP GRRWSDGQHQ AIEAKEALAI
QSETQTLASI TYQNFFLLYP RLAGMTGTAK TEEVEFEKTY KLETTIVPTN RVRARQDWAD
QVYKTEAAKW RAVANETAEI HKNGRPVLVG TTSVEKSELL SSLLAEQEIP HNLLNAKPEN
VERESEIVAQ AGRAGAVTIA TNMAGRGTDI ILGGNSDYMA RLKLREVLLG RLVKPEEDHT
PPVPLQRSAP GGFSDAAAPS LPRSGESLYP CPLTDDTDQA LGQLARDLVK AWGDRALTVI
ELEERIATAA EKAPTEAPQI QALREAIARV KGEYDAVVKQ EESRVREAGG LHVIGTERHE
SRRVDNQLRG RAGRQGDPGS TRFFLSLGDN LLRIFGGDRV AGLMNAFRVE EDMPIESGML
TRSLEGAQKK VETYYYDIRK QVFEYDEVMN NQRRAVYSER RRVLDGRALK KQVIGYGERT
MGEIVEAYVN PDLPPEEWDL DQLVGKVKEF IYLLEDLTPD QVQGLGMEEL KAFLQEQLRN
AYDLKEGQIE QQRPGLMREA ERFFILQQID TLWREHLQAM DALRESVGLR GYGQKDPLIE
YKNEGYDMFL EMMTNMRRNV IYSMFMFQPQ APKN