Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0080 |
Symbol | |
ID | 3737820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 78836 |
End bp | 80944 |
Gene Length | 2109 bp |
Protein Length | 702 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637774661 |
Product | excinuclease ABC subunit B |
Protein accession | YP_380414 |
Protein GI | 78211635 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.935466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGGAGC CGCAGCACTT CATCTTGCTC CCCGGCGATA ATCGACAGCC GCCGTCTGGC ACAGCAACTA TGCCCGCCTA CGACCTCACG GCTCCCTATT CCCCCAAAGG TGACCAGCCC ACGGCGATCG AGCAGCTGGT GAAGGGGGTG AATGGCGGCG AGCGCTATCA GACCCTGCTG GGGGCCACGG GCACGGGCAA GACCTTCACG ATGGCCAACG TCATCGCCAA GACCGGTCGT CCGGCGCTGG TGTTGGCCCA CAACAAGACG TTGGCGGCGC AGCTGTGCAA CGAGCTGCGG GAGTTCTTCC CCGAGAACGC CGTTGAATAC TTCATCTCTT ACTACGACTA CTACCAACCG GAGGCCTACG TTCCGGTCAG CGACACCTAT ATCGCCAAGA CGGCGTCGAT CAACGAGGAA ATCGACATGC TGCGCCATTC GGCGACCCGG TCGCTGTTTG AACGGCGTGA TGTGATCGTG GTGGCCTCGA TCAGTTGCAT CTACGGCCTT GGTATTCCCA GTGAATACCT CAAGGCGGCG GTGAAGTTCG AGGTGGGGGA GACCCTCAAC ATTCGCGGCC AGCTGCGGGA GTTGGTGAAC AACCAGTACA GCCGCAACGA CACCGAAATC GCCCGCGGTC GTTTTCGGAT GAAGGGGGAT GTGCTGGAGA TCGGCCCGGC TTATGAAGAC CGGCTGGTGC GCATTGAACT GTTCGGTGAT GAGGTGGAGG CGATTCGCTA TGTCGACCCC ACCACTGGCG AGATCCTGCA AAGCATGGAC GCGGTGAACA TCTACCCGGC CAAGCACTTC GTCACCCCGA AAGACCGGCT CGATTCGGCG ATCAGCGCCA TTCGCTCGGA GCTGCGGGAG CGGCTGGATG TGCTCAACGG CGAAGGCAAG TTGCTGGAGG CCCAGCGGCT GGAGCAGCGC ACCAAATACG ACCTGGAGAT GCTGGGGCAG GTGGGCTACT GCAACGGGGT GGAGAACTAC GCCCGCCATT TGGCTGGCCG GGAGGAAGGC ACCCCGCCGG AGTGCCTGAT CGATTACTTC CCGGACGACT GGCTGCTGAT CGTGGATGAG AGCCACGTCA CCTGCTCCCA GCTGCAGGCG ATGTACAACG GGGACCAGGC CCGTAAAAAG GTGCTGATCG AGCACGGCTT CCGCCTGCCC AGTGCCGCCG ACAACCGGCC GCTCAAGGGG GAAGAGTTCT GGGACAAGGC CAAGCAGACG GTGTTCGTCT CAGCCACCCC GGGCAACTGG GAAATGGAGG TGAGCGGCGG CGAGGTGGCC GAACAGGTGA TCCGCCCGAC TGGGGTGCTG GACCCAGTGG TGGAGGTGCG ACCCACCACC GGTCAGGTGG ACGATCTGCT GGGGGAAATC CGCGATCGGG CTGCCAAGAA CCAGCGGGTG CTGGTAACCA CCTTGACCAA GCGGATGGCG GAAGATCTCA CCGATTACCT GGCGGAGAAC GATGTGCGGG TGCGCTACCT CCACTCGGAG ATCCATTCGA TCGAGCGGAT CGAGATCATT CAGGACCTGC GGCTCGGGGA ATATGACGTG TTGGTGGGGG TGAACCTGCT GCGGGAGGGT CTGGACCTGC CGGAGGTGAG CCTGGTGGCG ATCCTCGATG CCGACAAGGA AGGCTTCCTG CGGGCTGAAC GCTCGTTGAT CCAGACCATC GGCCGTGCGG CTCGCCATGT GGAGGGGGTG GCGCTGCTCT ATGCCGACAA CATGACCGAG TCGATGGCCA AAGCCATCTC CGAGACCGAA CGGCGTCGGG CGATCCAGCA GGCCTACAAC GAGAAGCACG GCGTCGTGCC CACCGCTGCG GGCAAGAAGG CCAGCAACTC GATCCTCAGC TTCCTGGAGT TGAGCCGCAA GTTGAAGCAA GACGGTCCCG ATGCCGATCT GGTGGAAGTG GTGGGCAAGG CCGCCCAGGC CCTGGAGAAC GACCCCGATG CCGGCCTGGC GTTGGAGGCG CTGCCGGAGT TGATCGATCA GCTCGAGGCC AAGATGAAGG AGGCGGCCAA GAAGCTCGAC TTTGAGGAAG CCGCCAACCT GCGGGATCGG GTGAAGCAGC TGCGTCAGAA GATGGCCGGC TCCCGTTGA
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Protein sequence | MGEPQHFILL PGDNRQPPSG TATMPAYDLT APYSPKGDQP TAIEQLVKGV NGGERYQTLL GATGTGKTFT MANVIAKTGR PALVLAHNKT LAAQLCNELR EFFPENAVEY FISYYDYYQP EAYVPVSDTY IAKTASINEE IDMLRHSATR SLFERRDVIV VASISCIYGL GIPSEYLKAA VKFEVGETLN IRGQLRELVN NQYSRNDTEI ARGRFRMKGD VLEIGPAYED RLVRIELFGD EVEAIRYVDP TTGEILQSMD AVNIYPAKHF VTPKDRLDSA ISAIRSELRE RLDVLNGEGK LLEAQRLEQR TKYDLEMLGQ VGYCNGVENY ARHLAGREEG TPPECLIDYF PDDWLLIVDE SHVTCSQLQA MYNGDQARKK VLIEHGFRLP SAADNRPLKG EEFWDKAKQT VFVSATPGNW EMEVSGGEVA EQVIRPTGVL DPVVEVRPTT GQVDDLLGEI RDRAAKNQRV LVTTLTKRMA EDLTDYLAEN DVRVRYLHSE IHSIERIEII QDLRLGEYDV LVGVNLLREG LDLPEVSLVA ILDADKEGFL RAERSLIQTI GRAARHVEGV ALLYADNMTE SMAKAISETE RRRAIQQAYN EKHGVVPTAA GKKASNSILS FLELSRKLKQ DGPDADLVEV VGKAAQALEN DPDAGLALEA LPELIDQLEA KMKEAAKKLD FEEAANLRDR VKQLRQKMAG SR
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