Gene Syncc9605_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0080 
Symbol 
ID3737820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp78836 
End bp80944 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content63% 
IMG OID637774661 
Productexcinuclease ABC subunit B 
Protein accessionYP_380414 
Protein GI78211635 
COG category[L] Replication, recombination and repair 
COG ID[COG0556] Helicase subunit of the DNA excision repair complex 
TIGRFAM ID[TIGR00631] excinuclease ABC, B subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.935466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGGAGC CGCAGCACTT CATCTTGCTC CCCGGCGATA ATCGACAGCC GCCGTCTGGC 
ACAGCAACTA TGCCCGCCTA CGACCTCACG GCTCCCTATT CCCCCAAAGG TGACCAGCCC
ACGGCGATCG AGCAGCTGGT GAAGGGGGTG AATGGCGGCG AGCGCTATCA GACCCTGCTG
GGGGCCACGG GCACGGGCAA GACCTTCACG ATGGCCAACG TCATCGCCAA GACCGGTCGT
CCGGCGCTGG TGTTGGCCCA CAACAAGACG TTGGCGGCGC AGCTGTGCAA CGAGCTGCGG
GAGTTCTTCC CCGAGAACGC CGTTGAATAC TTCATCTCTT ACTACGACTA CTACCAACCG
GAGGCCTACG TTCCGGTCAG CGACACCTAT ATCGCCAAGA CGGCGTCGAT CAACGAGGAA
ATCGACATGC TGCGCCATTC GGCGACCCGG TCGCTGTTTG AACGGCGTGA TGTGATCGTG
GTGGCCTCGA TCAGTTGCAT CTACGGCCTT GGTATTCCCA GTGAATACCT CAAGGCGGCG
GTGAAGTTCG AGGTGGGGGA GACCCTCAAC ATTCGCGGCC AGCTGCGGGA GTTGGTGAAC
AACCAGTACA GCCGCAACGA CACCGAAATC GCCCGCGGTC GTTTTCGGAT GAAGGGGGAT
GTGCTGGAGA TCGGCCCGGC TTATGAAGAC CGGCTGGTGC GCATTGAACT GTTCGGTGAT
GAGGTGGAGG CGATTCGCTA TGTCGACCCC ACCACTGGCG AGATCCTGCA AAGCATGGAC
GCGGTGAACA TCTACCCGGC CAAGCACTTC GTCACCCCGA AAGACCGGCT CGATTCGGCG
ATCAGCGCCA TTCGCTCGGA GCTGCGGGAG CGGCTGGATG TGCTCAACGG CGAAGGCAAG
TTGCTGGAGG CCCAGCGGCT GGAGCAGCGC ACCAAATACG ACCTGGAGAT GCTGGGGCAG
GTGGGCTACT GCAACGGGGT GGAGAACTAC GCCCGCCATT TGGCTGGCCG GGAGGAAGGC
ACCCCGCCGG AGTGCCTGAT CGATTACTTC CCGGACGACT GGCTGCTGAT CGTGGATGAG
AGCCACGTCA CCTGCTCCCA GCTGCAGGCG ATGTACAACG GGGACCAGGC CCGTAAAAAG
GTGCTGATCG AGCACGGCTT CCGCCTGCCC AGTGCCGCCG ACAACCGGCC GCTCAAGGGG
GAAGAGTTCT GGGACAAGGC CAAGCAGACG GTGTTCGTCT CAGCCACCCC GGGCAACTGG
GAAATGGAGG TGAGCGGCGG CGAGGTGGCC GAACAGGTGA TCCGCCCGAC TGGGGTGCTG
GACCCAGTGG TGGAGGTGCG ACCCACCACC GGTCAGGTGG ACGATCTGCT GGGGGAAATC
CGCGATCGGG CTGCCAAGAA CCAGCGGGTG CTGGTAACCA CCTTGACCAA GCGGATGGCG
GAAGATCTCA CCGATTACCT GGCGGAGAAC GATGTGCGGG TGCGCTACCT CCACTCGGAG
ATCCATTCGA TCGAGCGGAT CGAGATCATT CAGGACCTGC GGCTCGGGGA ATATGACGTG
TTGGTGGGGG TGAACCTGCT GCGGGAGGGT CTGGACCTGC CGGAGGTGAG CCTGGTGGCG
ATCCTCGATG CCGACAAGGA AGGCTTCCTG CGGGCTGAAC GCTCGTTGAT CCAGACCATC
GGCCGTGCGG CTCGCCATGT GGAGGGGGTG GCGCTGCTCT ATGCCGACAA CATGACCGAG
TCGATGGCCA AAGCCATCTC CGAGACCGAA CGGCGTCGGG CGATCCAGCA GGCCTACAAC
GAGAAGCACG GCGTCGTGCC CACCGCTGCG GGCAAGAAGG CCAGCAACTC GATCCTCAGC
TTCCTGGAGT TGAGCCGCAA GTTGAAGCAA GACGGTCCCG ATGCCGATCT GGTGGAAGTG
GTGGGCAAGG CCGCCCAGGC CCTGGAGAAC GACCCCGATG CCGGCCTGGC GTTGGAGGCG
CTGCCGGAGT TGATCGATCA GCTCGAGGCC AAGATGAAGG AGGCGGCCAA GAAGCTCGAC
TTTGAGGAAG CCGCCAACCT GCGGGATCGG GTGAAGCAGC TGCGTCAGAA GATGGCCGGC
TCCCGTTGA
 
Protein sequence
MGEPQHFILL PGDNRQPPSG TATMPAYDLT APYSPKGDQP TAIEQLVKGV NGGERYQTLL 
GATGTGKTFT MANVIAKTGR PALVLAHNKT LAAQLCNELR EFFPENAVEY FISYYDYYQP
EAYVPVSDTY IAKTASINEE IDMLRHSATR SLFERRDVIV VASISCIYGL GIPSEYLKAA
VKFEVGETLN IRGQLRELVN NQYSRNDTEI ARGRFRMKGD VLEIGPAYED RLVRIELFGD
EVEAIRYVDP TTGEILQSMD AVNIYPAKHF VTPKDRLDSA ISAIRSELRE RLDVLNGEGK
LLEAQRLEQR TKYDLEMLGQ VGYCNGVENY ARHLAGREEG TPPECLIDYF PDDWLLIVDE
SHVTCSQLQA MYNGDQARKK VLIEHGFRLP SAADNRPLKG EEFWDKAKQT VFVSATPGNW
EMEVSGGEVA EQVIRPTGVL DPVVEVRPTT GQVDDLLGEI RDRAAKNQRV LVTTLTKRMA
EDLTDYLAEN DVRVRYLHSE IHSIERIEII QDLRLGEYDV LVGVNLLREG LDLPEVSLVA
ILDADKEGFL RAERSLIQTI GRAARHVEGV ALLYADNMTE SMAKAISETE RRRAIQQAYN
EKHGVVPTAA GKKASNSILS FLELSRKLKQ DGPDADLVEV VGKAAQALEN DPDAGLALEA
LPELIDQLEA KMKEAAKKLD FEEAANLRDR VKQLRQKMAG SR