Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0068 |
Symbol | dapA |
ID | 3737808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 65740 |
End bp | 66648 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637774649 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_380402 |
Protein GI | 78211623 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAGG CCGCCACCCT CTCGCCAACG CCCTTTGGCC GTGTGGTCAC CGCGATGGTG ACCCCCTTTG ATGCCAGCGG TGCTGTGGAT CTCAGCGTTG CCGCAAACCT GGCCCGGCAT CTCGTGGAAC AGGGCTCCGA TGGATTGCTG GTCTGCGGCA CCACCGGTGA ATCGCCGACC CTCAGCTGGG ACGAGCAGTT GCAGCTTCTG CAGGCAGTGC GTGATGCCGT TGGCAGTGAC GCCAAGGTGT TAGCGGGCAC CGGCAGCAAC TCCACAGCCG AAGCGGTGGA GGCCACCAAA GAAGCAGCGG CGGCTGGCGC GGATGGCGCT CTCGTTGTTG TGCCCTATTA CAACAAGCCT CCCCAAGAGG GGCTGGAGGC CCATTTCCGG GCCATCGCTG AAGCGGCTCC TGAGCTGCCA TTGATGCTTT ACAACATCCC TGGCCGCACC GGCTGCAGCA TAGCCCCGGC CACGGTGGCC CGGCTGATGG ACTGCCCCAA CGTGGTAAGT TTCAAGGCCG CCAGCGGCAC CACTGAAGAG GTCACTGCGC TGCGCCTGGC CTGCGGTCCG CAGTTGGCGA TTTACAGCGG TGACGACGGC CTCACCCTGC CGATGCTTGC GGTGGGTGCC GTTGGCGTGG TGAGTGTGGG CAGCCATGTG GCGGGCCCTG AGATCCGCGC CATGATCGAG GCCTATCTGA ATGGCGATGG TGCCTCCGCA CTCGCCCTGC ACGACGCGTT GATTCCTCTG TTCAAGGCCC TGTTCGCCAC CACCAATCCG ATTCCCGTCA AGGCTGCCCT GGAACTCAAT GGCTGGTCTG TCGGTGCACC CCGTCCGCCC CTGTGCTCAC TCTCTGACGA CATGAAACGT TCGCTTTCCA ACGCCATGGC CGCCCTCCGT CAGACCTAG
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Protein sequence | MTQAATLSPT PFGRVVTAMV TPFDASGAVD LSVAANLARH LVEQGSDGLL VCGTTGESPT LSWDEQLQLL QAVRDAVGSD AKVLAGTGSN STAEAVEATK EAAAAGADGA LVVVPYYNKP PQEGLEAHFR AIAEAAPELP LMLYNIPGRT GCSIAPATVA RLMDCPNVVS FKAASGTTEE VTALRLACGP QLAIYSGDDG LTLPMLAVGA VGVVSVGSHV AGPEIRAMIE AYLNGDGASA LALHDALIPL FKALFATTNP IPVKAALELN GWSVGAPRPP LCSLSDDMKR SLSNAMAALR QT
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