Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0066 |
Symbol | tig |
ID | 3737806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 63151 |
End bp | 64560 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637774647 |
Product | trigger factor |
Protein accession | YP_380400 |
Protein GI | 78211621 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCTG CAGCCCTGAA GGTGACCACC GAAGCCCGCC CCAGCAGCCG CCTGGCGGTG ACGGTCACCG TTCCTGGGGA GCGCTGCAAG ACGAGTTACG AAGACGCCAT CACCAGCCTG AGCCGCAGCA TCAACCTGCC GGGCTTCCGC AAGGGCAAGG TGCCGCGCAC GGTGCTGGTG CAACAGCTAG GAGGCGTGCG GATCAAAGCC ACGGCTCTGG AAAAGCTGAT CGATAACGCC TGGCGTGACG CCATCCAGCA GGAATCGCTG GAACCGATCA GTCAGCCTGA CCTGAGCAGT GGTTTTGACG GCCTGCTGGA GAGCTTTGAG CCCGGCAAGG AACTCACCTT CACCCTGGAA GCCGACGTCG CCCCGACGCC AAAGCTGAAA ACCACCAAGG GCCTGAAGGC GGAATTCGAA ACCGTCGCCT ACGACGCCTC ACGCGTCGAC GCGATGATTG AGGACTCCCG CAAGCAAATG GCCACGGTCG TTCCGGTGGA AGGTCGTGCC GCCCAGAACG GCGACATCGC TGTGCTCGGC TTCAAAGGCA CCTACACCGA TGACGGCAGC GAGATCGAGG GCGGCAGCGC CGATTCGATG GATGTGGACC TTGAAAATGG CCGGATGATC CCCGGCTTCA TCGAAGGGGT CATCGGCATG AAGGTCGGCG AGACTAAAAC CGTGGATTGC CAGTTCCCTG ACGACTACCC GAAGGAGGAT GCCCGCGGAC GTAAGGCCAG CTTCGAGATC GAACTGAAGG ACCTCAAGAC CCGCGAACTG CCCGAGCTGG ATGACGAATT CGCCAAGCAG GCCAGCGAAC AGGAGACCCT GGCGGACCTG CGCAAAGATC TGGAGCAGCG GCTCAAGGAC GACGCCGAAC GCCGTCAGAC CAGCAACCGC CGCGATGCCC TCGTCGCCGC CCTGGTGGAG CAGCTCGAGG TTGAGCTGCC CGAAGCACTG ATCCAACAGG AAAGCCGCAA CCTGCTGGAG CAGACCGCAG CCCAGTTCGC CCAGCAGGGC ATGGATGTGA AGTCGCTGTT CACTCCTGAC CTGGTGCGCA ACCTGATGCA GAACTCCCGC CCCGAGGCCG AAGAGCGTCT GCGCCGCAGT TTTGCCCTCA CCGCCCTGGC TGAAGCGGAG GACATCAAGC TCGACGACAA GGCCGTGGAC GCCAAGATCA AGGAGGTGAA GAAAGAGCTC TCCGCCGACG CCAAGATCGA TCCCGAGCGC TTGCGTCAGG CCGTTATGGA TGACCTGATT CAAGACCGTC TGATGGGCTG GCTTGAGGAG AACAGCACCA TCACCGAGAA GGCGCCGGCA GCTGACGACA GCAAGGCTGA AGCCAAGAAA AAGCCCGCTG CCAAGAAGGC CGAGGCCAAG AGCAAGTCCA AGGCAGACGC CAAGGACTGA
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Protein sequence | MSAAALKVTT EARPSSRLAV TVTVPGERCK TSYEDAITSL SRSINLPGFR KGKVPRTVLV QQLGGVRIKA TALEKLIDNA WRDAIQQESL EPISQPDLSS GFDGLLESFE PGKELTFTLE ADVAPTPKLK TTKGLKAEFE TVAYDASRVD AMIEDSRKQM ATVVPVEGRA AQNGDIAVLG FKGTYTDDGS EIEGGSADSM DVDLENGRMI PGFIEGVIGM KVGETKTVDC QFPDDYPKED ARGRKASFEI ELKDLKTREL PELDDEFAKQ ASEQETLADL RKDLEQRLKD DAERRQTSNR RDALVAALVE QLEVELPEAL IQQESRNLLE QTAAQFAQQG MDVKSLFTPD LVRNLMQNSR PEAEERLRRS FALTALAEAE DIKLDDKAVD AKIKEVKKEL SADAKIDPER LRQAVMDDLI QDRLMGWLEE NSTITEKAPA ADDSKAEAKK KPAAKKAEAK SKSKADAKD
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