Gene Syncc9605_0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0065 
Symbol 
ID3737805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp62433 
End bp63107 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content62% 
IMG OID637774646 
ProductATP-dependent Clp protease proteolytic subunit ClpP 
Protein accessionYP_380399 
Protein GI78211620 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGACG CCCGCAGTCA CCACCCCATC CAGAACCGCT GGCGGGCCGC CATGCCCGTC 
TCGGCACCGG GGCCGCTGCC CACGGTTGTT GAACAGTCCG GTCGCGGCGA CCGCGCCTTC
GACATCTATT CCCGCCTGCT GCGGGAGCGG ATCATCTTCC TCGGCACCGG TGTGGATGAC
GCCGTTGCCG ATGCCCTGGT GGCGCAGATG TTGTTCCTTG AAGCCGAGGA TCCCGAGAAG
GACATTCAGA TCTACATCAA CTCCCCGGGA GGGTCGGTAA CCGCTGGTCT GGCGATTTAC
GACACGATGC AGCAGGTTGC CCCTGACGTG GTGACCATCT GCTACGGCCT CGCCGCCAGC
ATGGGTGCCT TCCTGCTCTC CGGAGGCACC AAGGGCAAGC GACTCGCTTT GCCGAATGCC
AGGATCATGA TTCACCAACC CCTTGGTGGC GCCCAGGGAC AAGCGGTTGA CATCGAAATC
CAGGCGAAGG AAATCCTTTA CCTCAAAGAA ACCCTGAACG GGTTGATGGC GGAGCACACC
GGCCAGCCGC TCGACAAGAT CTCGGAAGAC ACCGACCGCG ACTACTTTCT TTCTCCGGCA
GAAGCGGTTG AATACGGCCT GATCGATCGC GTGGTGGACA GTTCCGGGGA CGGAGGAATC
ATTACGGAGA GCTGA
 
Protein sequence
MIDARSHHPI QNRWRAAMPV SAPGPLPTVV EQSGRGDRAF DIYSRLLRER IIFLGTGVDD 
AVADALVAQM LFLEAEDPEK DIQIYINSPG GSVTAGLAIY DTMQQVAPDV VTICYGLAAS
MGAFLLSGGT KGKRLALPNA RIMIHQPLGG AQGQAVDIEI QAKEILYLKE TLNGLMAEHT
GQPLDKISED TDRDYFLSPA EAVEYGLIDR VVDSSGDGGI ITES