Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0064 |
Symbol | clpX |
ID | 3737804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 60993 |
End bp | 62342 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637774645 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_380398 |
Protein GI | 78211619 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGT TCGACGCCCA TCTGAAATGT TCGTTCTGTG GGAAATCCCA GGACCAGGTG CGAAAGCTGA TCGCCGGACC TGGCGTTTAC ATCTGCGACG AATGCATCGA TCTCTGCAAC GAGATCCTGG ATGAAGAGCT GGTGGATGGT CAGGGCAACT CCCGCCACAG CCATGAGCCG AGCAGGAAGG CCATGCCAGC CGCCCGCAAG AGCAGCAAAC CGGCCCCGAC CCTGGCTTCC ATTCCAAGAC CTCAGGACAT CAAGAGCTTC CTGGATCAGC AGGTGGTCGG CCAGGACGCG GCCAAGAAGG TGATGTCTGT GGCGGTCTAC AACCACTACA AACGTCTGGC CTGGCAGGGG GATGGCCAGG GCGAAACCGA GGAAACAGCA ACCCGGCTGC ACAAGAGCAA CATCCTGCTG ATCGGACCCA CCGGCTGCGG CAAAACGCTG CTGGCCCAGA CCCTGGCCGA AATGCTGGAC GTGCCCTTCG CCGTGGCCGA TGCCACCACC CTCACCGAAG CGGGCTACGT GGGCGAGGAC GTGGAAAACA TCCTGCTGCG GCTGCTGCAG AAAGCCGAGA TGGATGTGGA CCAGGCCCAG CGGGGCATCA TCTACATCGA TGAAATCGAC AAGATCGCCC GCAAAAGCGA GAACCCCTCG ATCACAAGGG ATGTGTCCGG CGAAGGGGTG CAGCAGGCCC TGCTGAAAAT GCTTGAAGGC ACGGTGGCCA ACGTGCCGCC CCAAGGAGGC CGAAAGCACC CCTATCAGGA CTGCATCCAG ATCGACACCA GCCAGATTCT GTTCATCTGC GGTGGTGCCT TCGTCGGCCT GGAAGACGTG GTGCAGAAAC GCATGGGCCG CAATGCCATC GGCTTCATGC CCAGCGACGG CCGTGGACGC AGCCGCGCCA ACCGCGACCT TCAGGCCGCC CAGGTGCTGC GGCACCTGGA GCCGGATGAT CTGGTGCGCT ATGGCCTGAT CCCCGAATTC ATCGGCCGGA TGCCGGTGAG TGCCGTGCTG GAGCCCCTGG ACGAAAGCGC CCTGCAATCG ATCCTCACCG AACCCCGCGA TGCTCTGGTG AAGCAGTTCC GCACCCTGCT GAGCATGGAC AACGTGCAGC TGCAGTTCGC CGATGACGCC ATCGAGGCGA TCGCCCAAGA GGCGCACCGG CGCAAGACCG GGGCCCGTGC ATTGCGCGGC ATCGTTGAGG AGCTGATGCT GGACCTGATG TACGACCTTC CTTCCCAGAC ATCGGTGAAA GAGTTCACCG TCACCCGGGC GATGGTTGAG GAACACACGG GCGGCAAGGT GCTCCCCCTG CCTGGCGCGG AACAACAGAA GACCGCCTGA
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Protein sequence | MAKFDAHLKC SFCGKSQDQV RKLIAGPGVY ICDECIDLCN EILDEELVDG QGNSRHSHEP SRKAMPAARK SSKPAPTLAS IPRPQDIKSF LDQQVVGQDA AKKVMSVAVY NHYKRLAWQG DGQGETEETA TRLHKSNILL IGPTGCGKTL LAQTLAEMLD VPFAVADATT LTEAGYVGED VENILLRLLQ KAEMDVDQAQ RGIIYIDEID KIARKSENPS ITRDVSGEGV QQALLKMLEG TVANVPPQGG RKHPYQDCIQ IDTSQILFIC GGAFVGLEDV VQKRMGRNAI GFMPSDGRGR SRANRDLQAA QVLRHLEPDD LVRYGLIPEF IGRMPVSAVL EPLDESALQS ILTEPRDALV KQFRTLLSMD NVQLQFADDA IEAIAQEAHR RKTGARALRG IVEELMLDLM YDLPSQTSVK EFTVTRAMVE EHTGGKVLPL PGAEQQKTA
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