Gene Syncc9605_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0062 
Symbol 
ID3737802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp58482 
End bp60326 
Gene Length1845 bp 
Protein Length614 aa 
Translation table11 
GC content67% 
IMG OID637774643 
ProductDNA polymerase III, tau subunit 
Protein accessionYP_380396 
Protein GI78211617 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCGG CCTACCAGCC GCTGCATCAC AAATACCGGC CCCAGCGCTT TGATCAGCTG 
GTGGGGCAGG AGGCGATCGC CGCCACCCTT GGCCACGCCC TCACCAGCAA TCGCATTGCC
CCGGCCTATC TGTTCAGTGG CCCCCGCGGC ACCGGCAAAA CCTCCAGCGC CCGCATCCTG
GCCCGCTCGC TCAATTGCCT GAACAGCGAA GGGCCCACCC CAGAGCCCTG CGGGACCTGC
GAGCTCTGCA CCACGATCGC CGCCGGCACC GCCCTCGATG TGATCGAGAT CGATGCCGCC
TCCAACACCG GCGTCGACAA CATCCGCGAG CTAATCGAAC GCTCCCGCTT CGCACCGGTG
CAGGCCCGCT GGAAGGTGTA CGTGGTGGAC GAGTGCCACA TGCTCTCCAC CGCAGCCTTC
AACGCTCTGC TGAAAACCCT GGAGGAGCCC CCGCCGCAGG TGGTGTTCGT GCTCGCCACC
ACCGACCCGC AACGGGTGCT GCCGACGATC CTCAGCCGTT GTCAACGCTT TGATTTCCGA
CGCATTCCTC TGGATGCCCT CAACACGCAT CTGAGCTGGA TCGCTGAACA AGAAGCGATC
GAGATCAAGC CTGAGGCCAT TCATGTGGTG GCCCAACGGT CCCAGGGAGG CCTGCGGGAT
GCGGAAAGCC TGCTGGATCA GCTGAGCCTG CTGCCGCCAC CGATCGAAGC CGCAGCGGTG
TGGGACCTGC TCGGGGCCGT GCCTGAACAG GAGCTCCTGG AGCTGGTGGG GGCCATGAGC
AGCGCCGAAC CTGTGCAGCT GCTGGAGGCC ACCCGCAACC TGCTGGACCG GGGCCGGGAT
CCCGGGGCCG TATTGCAGGG TCTGGCCGGG ATGCTGCGGG ACCTGGTGCT GATGGCGGCC
GCTCCTGATC GGCTGGAGCT CACCAGCGTG TCGCCCCAGT TCCGCGAGCA GCTGCCCGCC
CTCGCCAAGG CCATCGGCAG GGCCCGATTG CTGCAGTGGC AGGCGCAGCT CCGCGGCACC
GAGCAACAAC TGCGCCAAAG CATGCAGCCG CGCCTGTGGC TGGAAGTGCT GCTTTTGGGC
TTGCTGGCGG AACCGTTGGC GGCTCAGAGC GCAGCCGCAG CTCCGGCCCC AAGACAACCA
GCGACAACGC AGCCGGCAGC AGCAGCAAGC CCCCCGACAA CACCAGTCGC CCTTCCTGCT
CCGACGCCTT CCACCGCAGC CCCTGCAATC GAGGCGTCCA CCCCCAGCCC AAAACCTGCC
CCTGCTCCAT CACCGGAACT TCCGTCGGTC GCCACCCCTA CACCGGCAGC CAGCACCAAC
CTGCCCGAGC TTTGGCAACA GATCCTGGGC AGCCTCGAAC TGCCCTCCAC CCGGATGCTG
CTATCGCAGC AGGCCCAACT TGTGCGCCTG GATGCAAACC GCGCCGTTGT GCAGGTGGCA
GGCAACTGGA TGGGGATGGT GCAAAGCCGG GCATCCCTGC TGGAACAGGC CGTGGCCAAA
GCGCTGGGCG GCTCGAGGCA GCTGGTGCTG GAGGCCAACA ACAGCGCCAT GCCACCTCCG
CTTGCAACAG CCCCGGCAGC GGTCGAGCCC CCCGCACCAA CACCGGCGCC AACGCCGGCA
CCCACGGCTG CACCGCTCCA GGCACCCCCA GCAACACAAA GCCCTCCCCC GGCCGTTGCA
CCGGAACTGC CGCGCACCCA ATCCGAGCCG ATCGAGCCGA AACCAACTCC ACCCACAGCC
GAATCCAACC CTCAACCAAG CCCGCCGTCA GGCCTGGATC GTCAGGCCCG CAATCTGGCG
GACTTCTTCA ATGGTCAGGT GCTCGACGTC GATGAAATCA GCTGA
 
Protein sequence
MSSAYQPLHH KYRPQRFDQL VGQEAIAATL GHALTSNRIA PAYLFSGPRG TGKTSSARIL 
ARSLNCLNSE GPTPEPCGTC ELCTTIAAGT ALDVIEIDAA SNTGVDNIRE LIERSRFAPV
QARWKVYVVD ECHMLSTAAF NALLKTLEEP PPQVVFVLAT TDPQRVLPTI LSRCQRFDFR
RIPLDALNTH LSWIAEQEAI EIKPEAIHVV AQRSQGGLRD AESLLDQLSL LPPPIEAAAV
WDLLGAVPEQ ELLELVGAMS SAEPVQLLEA TRNLLDRGRD PGAVLQGLAG MLRDLVLMAA
APDRLELTSV SPQFREQLPA LAKAIGRARL LQWQAQLRGT EQQLRQSMQP RLWLEVLLLG
LLAEPLAAQS AAAAPAPRQP ATTQPAAAAS PPTTPVALPA PTPSTAAPAI EASTPSPKPA
PAPSPELPSV ATPTPAASTN LPELWQQILG SLELPSTRML LSQQAQLVRL DANRAVVQVA
GNWMGMVQSR ASLLEQAVAK ALGGSRQLVL EANNSAMPPP LATAPAAVEP PAPTPAPTPA
PTAAPLQAPP ATQSPPPAVA PELPRTQSEP IEPKPTPPTA ESNPQPSPPS GLDRQARNLA
DFFNGQVLDV DEIS