Gene Syncc9605_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0060 
Symbol 
ID3735584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp55913 
End bp57232 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content62% 
IMG OID637774641 
Productputative glycosyltransferase 
Protein accessionYP_380394 
Protein GI78211615 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCGA ACGCCACATC GGGTGATCAC CGTCGGGTGA AATCGGCAGC GTTCCTGTTC 
GCCTGTGGAT GTGCTGGTGC AGCTCCCCAT TGGCTCGACT CCGCCCGTTC GCTCTGGCCC
GCCATCAGCC TTGCCTTGAT GCTCGGGGGC TATGGGCTTC GTTCTGTCAT GCGCGGGCAG
CTGACGCGTG GGTCATCGGA GTCCGGACCA GCGGTCGATC CAGCGAAGCT GCCCAGCCTT
GATGTGGTGG TTGCAGCCCG TGATGAAGAG GCGGTGGTGC CGCGTTTGGT GGAACGGCTC
ACATCCCTTC GCTATCCGTC CGGCCAACTC ACCACTTGGG TGATCGACGA CGGAAGTCTT
GATCGGACCT CCGAGTTGCT GGACGATCTG GCCAGCCAGC ACCCTGGACT CAATGTCATC
CATCGCCAGC GCAATGCCGG TGGTGGCAAG TCGGGTGCGC TCAACACCGC CTTGAACCGT
CTCAAGGGTG AGTGGCTGTT GGTGCTTGAC GCGGATGCCC AATTGCAGGA CGACCTGCTT
GAGCGTCTTG TCCCCTACGC CCTGGATGGT GGTTGGTCGG CGGTGCAGCT GCGTAAGGCC
GTGATTGACG CCGATCGCAA TTGGCTGACG CGATCCCAGG CGATGGAGAT GGCTCTTGAT
GCGGTGATCC AGTCGGGGCG TCTGGCCAAT GGAGGGGTGG CAGAGCTGCG GGGAAACGGA
CAGCTGATCA AGCGCTCGGT GCTGGAGGCC AGCGGCGGCT TCAACGAAGA CACCGTCACC
GATGACCTTG ACCTCAGCTT CCGCCTGTTG ACCCATGGCG CCTTGGTGGG ATTGTTGTGG
GACCCTCCGG TTCAGGAAGA GGCGGTACCT GGTCTTCAGG CCCTGTGGAA GCAACGGCAG
CGCTGGGCGG AAGGTGGCTT GCAGCGGTTC TTCGATTACT GGCCGGTGCT CACCTCAGCG
CAGTTGAGTC TTCGCCAGCG CTTGGATCTG ACGGCCTTTT TTCTGCTCCA GTACGCCTTG
CCGGTGGTGT CCTTCGCTGA CCTGAGCACG GCTCTGATCA CCCGAAGCCT GCCGGTCTAT
TGGCCTTTGT CTGTGGTTGC GTTCAGCGTG TCGGGTCTGG CCTATTGGCG TGGATGTCGC
GATGGCAGCG AGGGGCCGGC GATTCCCTCA GCGAGCCTGG CCAATCTGCT CGTCGCGATT
GCCTACCTGG GCCATTGGTT TGTGGTGATT CCCTGGGTGA CCTTGCGGAT GTCACTGCTC
CCCAAACGCC TGGTCTGGGC CAAAACCAGC CATGGTCAGG ACCAGCCCAT CCAGGTCTGA
 
Protein sequence
MSSNATSGDH RRVKSAAFLF ACGCAGAAPH WLDSARSLWP AISLALMLGG YGLRSVMRGQ 
LTRGSSESGP AVDPAKLPSL DVVVAARDEE AVVPRLVERL TSLRYPSGQL TTWVIDDGSL
DRTSELLDDL ASQHPGLNVI HRQRNAGGGK SGALNTALNR LKGEWLLVLD ADAQLQDDLL
ERLVPYALDG GWSAVQLRKA VIDADRNWLT RSQAMEMALD AVIQSGRLAN GGVAELRGNG
QLIKRSVLEA SGGFNEDTVT DDLDLSFRLL THGALVGLLW DPPVQEEAVP GLQALWKQRQ
RWAEGGLQRF FDYWPVLTSA QLSLRQRLDL TAFFLLQYAL PVVSFADLST ALITRSLPVY
WPLSVVAFSV SGLAYWRGCR DGSEGPAIPS ASLANLLVAI AYLGHWFVVI PWVTLRMSLL
PKRLVWAKTS HGQDQPIQV