Gene Syncc9605_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0050 
Symbol 
ID3735574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp47206 
End bp48993 
Gene Length1788 bp 
Protein Length595 aa 
Translation table11 
GC content62% 
IMG OID637774631 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_380384 
Protein GI78211605 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID[TIGR03423] penicillin-binding protein 2 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTT CCGCCCAGCA GCGTCAGACC GGTCTGCGTC AGCAACCCCT TGTGCTGCTG 
CTGCTGGTTT TGCTGTTCTG CAGCGCCATG GTCAGTCGCC TGGTGTGGAT GCAGCTGCTG
GAGGGATCGC GTTTTCGCGA ACTGGCGGAC GAAAACCGCA TTCGTCTGGT GCCCCGCTCG
CCGATCCGCG GTCGATTGCT TGATCGCAAA GGCCGGGTGC TGGCCACCAG CAAACTCACT
TACTCCCTCT ACCTTGAGCC GCGTCTGGTC AGCGATGACG ACTGGCCTGG TCTGCGTGAT
CGCTTGGCGC GGCTGCTGAA TTTGAAGCCT GATCTGCTCG ACCAGCGCCG GCAGAAGGGC
CTGGATCGGG ATGGTTACCG CACCACGTTG GCCCTCGATC TCAAGCCGGA ACAGGTGCTG
CGCTTCCGTG AACAGGCTCT CGGGCTGCGG GGCGCCCAGG TGGATGTCGA CATTCTGCGG
TCCTATCCCA ACGGAACCCT AGCGGCTCAT GCCCTCGGCT ATACCCAGCC GATCACGGAA
AACGAATTCG AGATCCTGGC GGAAAAGGGC TACAAGATCC GAGACCGCAT TGGTCGCACC
GGTGTTGAAG CGGCCTACGA GGGCCATTTG CGCGGGAAGT GGGGTGGTCA GATGCTCGAG
GTGAATGCCA TGGGCGAAGT GCAGCGCAAC CTGGGCGATC GACCGTCTCA AGCAGGAAAG
GATCTGGTAC TTACCCTCGA TCTGGATTTG CAGCGGGTGG CGGAGCAGGC GCTGGCCGAC
AAGCCAGGTG GCGCTGTTGT GGCTCTCGAG GCCGCAACAG GTGCGGTCCT GGCCCTCGCC
AGTCGTCCCA GCTTTGATCC GAATTTTTTC TCCAAGCTGA TCACCACCCA GAAGGAGTAC
GACGCCCTCT TCTCCAATCC GAAAAAACCG TTGCTGTCCC GGGCCATGAA TCCCTATGAC
CCCGGCAGCA CCTGGAAGCC AGTGACGGCG ATGGCGGGCA TGGAATCCGG CAAATTTCCG
CCCGACACCA AGCTGCACAC CAAGGCTTGC ATCACCTACG GCGGCCACTG CTTCCCGGAC
CACAACGGCA AGGGTTTCGG CACCATCGGT TATGTCGATG CCCTGCGCCA CTCGAGCAAC
ACGTTCTTCT ATCAGGTGGG CGTCGGGGTT GGATCCCTGG CGTTGAAGCA GGCTGCTGAT
CAGCTTGGGT TTCAGCAGAA AACTGGCATT GAGATCGGCT GGGAAGAGAG TGTCGGGCTG
GTGGGAGATG AGCCCTGGGC CGATCGTGGC CGGGGTTGGG CGGAGCCCGG CACGGTGCCC
TGGATCCCTG AGGACATGGC CAGTGCTTCC ATCGGTCAGT CCGTTGTGCA GATCACCCCC
CTGCAGTTGG CCCGTGCTTA TGCGGTGTTC GCTAATGGCG GTTGGTTGGT GACGCCGCAT
CTCGCCGCTG GTGACATCGA CTGGATGAGT CCGGAGCACC GCACCAAGGT GGCGATTCAG
CCGTCGACGT TGCAGACGAT CCGGGAGGGC CTTCGCAAGG TGGTTGAGGC AGGTACCGGT
GCCGGCCTCA ATGGTCCTGG TATTCGACCG GCGGCGGGCA AAACCGGAAC GGCAGAAGAC
AGCACGGGAG GGCCTGACCA TGCCTGGTTC GGCTGCTATG CCCCCTATCC CGACGGCAAG
ATCGTGGTGG TGGCCTTTGC CCAGAACACC CCTGGAGGTG GGTCGGTCCA CGCTTTGCCG
ATGGCCAAGA AAGTGCTGAC GGAGTGGGAG CGGACCTGGC AGCGCTAG
 
Protein sequence
MTRSAQQRQT GLRQQPLVLL LLVLLFCSAM VSRLVWMQLL EGSRFRELAD ENRIRLVPRS 
PIRGRLLDRK GRVLATSKLT YSLYLEPRLV SDDDWPGLRD RLARLLNLKP DLLDQRRQKG
LDRDGYRTTL ALDLKPEQVL RFREQALGLR GAQVDVDILR SYPNGTLAAH ALGYTQPITE
NEFEILAEKG YKIRDRIGRT GVEAAYEGHL RGKWGGQMLE VNAMGEVQRN LGDRPSQAGK
DLVLTLDLDL QRVAEQALAD KPGGAVVALE AATGAVLALA SRPSFDPNFF SKLITTQKEY
DALFSNPKKP LLSRAMNPYD PGSTWKPVTA MAGMESGKFP PDTKLHTKAC ITYGGHCFPD
HNGKGFGTIG YVDALRHSSN TFFYQVGVGV GSLALKQAAD QLGFQQKTGI EIGWEESVGL
VGDEPWADRG RGWAEPGTVP WIPEDMASAS IGQSVVQITP LQLARAYAVF ANGGWLVTPH
LAAGDIDWMS PEHRTKVAIQ PSTLQTIREG LRKVVEAGTG AGLNGPGIRP AAGKTGTAED
STGGPDHAWF GCYAPYPDGK IVVVAFAQNT PGGGSVHALP MAKKVLTEWE RTWQR