Gene Syncc9605_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0044 
Symbol 
ID3735568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp40990 
End bp42138 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content63% 
IMG OID637774625 
Productsoluble hydrogenase small subunit 
Protein accessionYP_380378 
Protein GI78211599 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGACA AGCTCACCCT GATGATTCCG GGCCCCACCC CGGTGCCGGA AACGGTACTG 
AAGGCCATGG GTCGTCACCC CATTGGCCAC CGCAGCGGGG AGTTCCAGGC CATCGTGCGG
CGCACCACCG AACAGCTCAA GTGGTTGCAC CAGACGACGA GCGACGTCCT GGTGATCACC
GGCAGCGGTA CCGCCGCCAT GGAGGCGGGA ATCATCAACA CCCTCAGCCG CGGCGAGAAG
GTGCTCTGCG GTGACAACGG CAAATTCGGC GAACGTTGGG TCAAGGTCGC CCGCGCCTAC
GGACTGGATG TTGAGGTGAT CAAGGCGGAG TGGGGCCAAC CCCTCGATCC GGAGGCCTTC
CGCTCAGCAT TGGAAGCCGA CAGCGCCAAA GCGATCAAGG CCGTGATCCT TACCCACTCG
GAAACCTCGA CAGGGGTGAT CAATGACCTG GAGAGCATTG CCCGTCACGT GAAGACCCAC
GGCACGGCGC TGACCCTGGC GGACTGCGTC ACCAGCCTGG GTGCCACCAA CGTGCCCATG
GACGCCTGGG GACTGGATGT GGTGGCTTCA GGCGCACAAA AGGGCTACAT GCTCCCGCCG
GGCCTCAGTT TTGTGGCCAT GAGCGCACGG GCCTGGGAGG CCTACGAGCG CTCCGATCTG
CCCAAGTTTT ATCTGGATCT GGGCCCCTAC CGGAAAACAG CGGCGAAGGA CAGCAACCCC
TTCACACCGG CAGTGAACCT CTACTTCGGC CTGGAAGCTG CTCTGGACAT GATGCAGAAG
GAAGGCCTGG AGGCGATTTT TGCCCGCCAT GCCCGCCATC GCGCCGCCGC CCAGGCAGGT
ATGAAGGCCA TGGCCCTGCC TCTGTTTGCC GCCGAGGGTT ACGGCAGCCC GGCCATCACC
GCGGTGGCTC CCGAAGGCAT CGACGCCGAA CAGTTACGCA AGGCCGTGAA GGAGAAATTC
GACATTCTTC TGGCTGGAGG ACAAGACCAT CTGAAAGGGC AGGTGTTCCG TATCGGCCAT
CTCGGCTATG TCTGCGACCG GGATGTTCTG ACCGCAGTCG CTGCGATTGA AGCCACCCTT
CAGTCCCTCG GCCTGCACAA AGGCAGCATG GGAGCAGGTG TCGCTGCAGC CTCGGCTGCT
CTGGGTTAA
 
Protein sequence
MQDKLTLMIP GPTPVPETVL KAMGRHPIGH RSGEFQAIVR RTTEQLKWLH QTTSDVLVIT 
GSGTAAMEAG IINTLSRGEK VLCGDNGKFG ERWVKVARAY GLDVEVIKAE WGQPLDPEAF
RSALEADSAK AIKAVILTHS ETSTGVINDL ESIARHVKTH GTALTLADCV TSLGATNVPM
DAWGLDVVAS GAQKGYMLPP GLSFVAMSAR AWEAYERSDL PKFYLDLGPY RKTAAKDSNP
FTPAVNLYFG LEAALDMMQK EGLEAIFARH ARHRAAAQAG MKAMALPLFA AEGYGSPAIT
AVAPEGIDAE QLRKAVKEKF DILLAGGQDH LKGQVFRIGH LGYVCDRDVL TAVAAIEATL
QSLGLHKGSM GAGVAAASAA LG