Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0038 |
Symbol | |
ID | 3736401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 36970 |
End bp | 38574 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637774618 |
Product | DEAD/DEAH box helicase-like |
Protein accession | YP_380372 |
Protein GI | 78211593 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGTCAA AACCCACAAT GACCTGTTGC TTGGATCTCT CTCCGGCAGG ACTGGTCCGG GTGGTCAGCC CGTTTGATGC GGTAACCCAG TCCCAGTTGC GTCGGATCAA GCCCAGGGGG CGTTGGATCG GCCCCGGCCA TGGCTGGGAT TTCCCCTTGG CCGCAGCCGG TGCACTTCAG CAGACCCTCG GGCGTCGTTT TCCTGTCACC GCTGCTTTGC AGCAGTGGCT TGATTGGTGC CAGCACCCCC TGCCACCGCT GCCGCCGCAT CGGACCCTTG TAGCCGCAGC AGATCTTGAC GAAGCCCTGC AGGATGGTCG CCGACCTCTG CGCCATCAAC GCTCCGGGGT CCGTTGGCTT TTGGCCCGTC GCGGCGCCGT TCTGGCCGAT GAGATGGGGC TGGGGAAGAC CCTCACAGCC CTCTTGGCGG CCCGTGCCCT GATGCGCTGC GCTGAGGTGC GGTTGCTGGT GGTGGCTCCC GTCGGCCTCC ACCCTCACTG GCGCCGGGAA TCAGAGGCCC TTGGCGTTGA GCTGGAGTTG GTCAGCTGGG CTCGCCTGCC CGACACCCTG CCGCCTGCGG GAACGCTACT GGTGGTGGAT GAGGCGCATT ACGCCCAGTC GCTTCAGGCG CAGCGCACGG CTGCCTTGCT GCGTCTGGCC CGTCATCCCC GCCTACGGGC GATCTGGATG CTTACGGGAA CCCCAATGAA GAACGGTCGC CCGTCCCAGT TGTATCCCCT GCTTGCGGCC ATGGACCATC CGATTGCGCG GGATCAACGC CAGTTCGAGG AGCGCTACTG CCAGGGGCAC TGGCGGGAGG GTCGAACCGG CAAACGCTGG CAGGCTTCCG GGGCGAGTCA GCTGGAGGAG CTGCGGCGCT TGAGTCGACC GTTGATCCTG CATCGCCGCA AGCAGCAGGT GGTGGATCTT CCTCCCAAGC AGCGACGTCT ACACCCCGTG ATGCTGTCGG AGGCTGAGCT CACAGGTTTC GACCATCGTG TCGAGCTGGT GCTGGATGAC TACCGGCGTC GGGCCCGTCT CGGAGAGGTG CGACGGGATG CTGAGCACCT GGCTCTGCTC ACCTCCATGC GTCAGATCGC TGCGGAATTC AAATTGCCGG CGGCCCAGCA GCTGGTGGAG TCACTCCGCC GGCAAGGCGA GGCGGTGGTG CTGTTCAGTG GCTTTGTTGC CCCGTTGCAC TTGTTGCAGC AAACCCTCGG CGGCGAGTTG TTAACCGGTC GCCAGCGCCC AGCTGAACGT CAGGAGAGTG TGGATCGGTT TCAGCAGGGT CAGAACGATT GTCTGTTGGC CACCTTCGGC ACCGGTGCCC TTGGCTTCAC CCTGCACCGG GCCCGTCATG TGGTGTTGCT GGAACGCCCC TGGACGCCAG GCGACCTCGA CCAAGCTGAA GATCGCTGTC ATCGTCTTGG CATGGGGGAC GGTCTGACCT GTCATTGGCT GCAGCTCGGC GCAGCGGATC AGCTGGTGGA TGGTTTGTTG GCGAGCAAGG CGGAACGGAT CGAGGTGTTG CTGGGCCCCC GGCGCTTCTC GCTGCAACGT CAGTCACTCT CCGCCATGGT GGGGGATTGT TTGCAGGTGC TCTGA
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Protein sequence | MPSKPTMTCC LDLSPAGLVR VVSPFDAVTQ SQLRRIKPRG RWIGPGHGWD FPLAAAGALQ QTLGRRFPVT AALQQWLDWC QHPLPPLPPH RTLVAAADLD EALQDGRRPL RHQRSGVRWL LARRGAVLAD EMGLGKTLTA LLAARALMRC AEVRLLVVAP VGLHPHWRRE SEALGVELEL VSWARLPDTL PPAGTLLVVD EAHYAQSLQA QRTAALLRLA RHPRLRAIWM LTGTPMKNGR PSQLYPLLAA MDHPIARDQR QFEERYCQGH WREGRTGKRW QASGASQLEE LRRLSRPLIL HRRKQQVVDL PPKQRRLHPV MLSEAELTGF DHRVELVLDD YRRRARLGEV RRDAEHLALL TSMRQIAAEF KLPAAQQLVE SLRRQGEAVV LFSGFVAPLH LLQQTLGGEL LTGRQRPAER QESVDRFQQG QNDCLLATFG TGALGFTLHR ARHVVLLERP WTPGDLDQAE DRCHRLGMGD GLTCHWLQLG AADQLVDGLL ASKAERIEVL LGPRRFSLQR QSLSAMVGDC LQVL
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