Gene Syncc9605_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0036 
Symbol 
ID3736399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp35256 
End bp36209 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content62% 
IMG OID637774616 
Producthypothetical protein 
Protein accessionYP_380370 
Protein GI78211591 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCCG ATCTTGTCAA GCGGTCACGG CCGCTGTCGG CTGACAGCAA GCTGCTGGTG 
CTGGGCGGCG GATACAGCGG ACGTTGTCTG GCCGGCCTGG CCCGAGCCCT GGGAACACCG
GTGCTCTGCA CCCGGCGTTC CCTCGACTCT GCCGAGGCTG ATCTGCTCTT CGACAGCAAC
GGTCAGGACC AGCTCGACCC TGCTTCCCTC GAAGGCATCA CCCATCTGCT GTCCACCATC
CCACCGGATC GCGACGGCAA CGATCCAGTT TTGTTGAAGC TGCTGCCAAC GCTCGGAAAC
CTGCCGCTGC GCTGGGCGGG CTATCTCTCC ACCACAGGGG TTTACGGCGA TCGTCAGGGC
GGTTGGGTGT CGGAGCATGA CGACCCGGCG CCGGCGCTGG ACCGCAGCAT GCGCCGCTTG
AACTGCGAAC AAGCTTGGTT GCGCTCGGGT CTGCCGATCC AGATTCTGCG TCTGCCAGGC
ATCTATGGCC CGGGCCGATC AGTGCTCAAC GGCTTAGAGC AAGGGCGTGC CCGCTTGATC
GACAAGCCCG GCCAGGTGTT CTGCCGCATC CATGTGGAAG ACATCGCAGG GGCCTGCTGG
CACCTCATGC ATCGCGCTGA ACAAGGTGTT CCAGCAAGCC CAGGAAATGG GAGCATCGTG
AATGTGGTGG ATGACCTCCC GGCTCCCACC GCCGAACTGA TGCGACATGC GGCAGACCTA
TTGGGTTGTG CTCTGCCACC GCTCAAACCG TTCGACCAGA TCGTGGAGAG CATGAGTCCA
ATGGCTCAGT CGTTCTGGAG CGAGAACCGC CGCGTCAGCA ACCACAAGCT CTGTCAAGAG
CTCGGTTATG CATTGCTGCA CCCGAACTAC CGCGTCGGGC TGCAGGATTG CCTGAACCAG
GACAAACTCA ATTCGCTTGA CCTGGGTTCT CCCCCTCGAT CAGCCAACGG TTGA
 
Protein sequence
MLADLVKRSR PLSADSKLLV LGGGYSGRCL AGLARALGTP VLCTRRSLDS AEADLLFDSN 
GQDQLDPASL EGITHLLSTI PPDRDGNDPV LLKLLPTLGN LPLRWAGYLS TTGVYGDRQG
GWVSEHDDPA PALDRSMRRL NCEQAWLRSG LPIQILRLPG IYGPGRSVLN GLEQGRARLI
DKPGQVFCRI HVEDIAGACW HLMHRAEQGV PASPGNGSIV NVVDDLPAPT AELMRHAADL
LGCALPPLKP FDQIVESMSP MAQSFWSENR RVSNHKLCQE LGYALLHPNY RVGLQDCLNQ
DKLNSLDLGS PPRSANG