Gene Syncc9605_0035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0035 
SymbolpdxA 
ID3736398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp34096 
End bp35112 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content65% 
IMG OID637774615 
Product4-hydroxythreonine-4-phosphate dehydrogenase 
Protein accessionYP_380369 
Protein GI78211590 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1995] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCCCC ACGATTCAAC GAACCCTAGG CACGAGCTGG TGATCGCTCT CGGCGATCCC 
GCAGGCATCG GCATGGAAGT GGTGCTGAAG GCCCTCGCCT CACCCACGCT CCCCCCCGCG
CTCCAACCCC TGCTGGTGGG TTGTCGACGC ACGTTGATCA GCACCCACGC GCGACTGCAG
CGGCAAACGA GCCACCCCCT TGCCGACCCT GCAGCCCTCA GAATTGACGA CCATCCGCTG
GAAGCGGGCG TTCAGCCAGG ACAACCCACC ACCGGAGGGG CCGATGCGGG GTTTCGCTGG
CTCACCCGCG CCGTGGAACT GCTGCAGGAA CGAGGGTCCC GCGCCCTGGT CACCGCCCCC
ATTGCCAAAC ACCTCTGGCA TGCGGCCGGC CATCGCTATC CCGGGCAGAC CGAACGGCTG
GCTGAGTTGG CTGGACGCCA GCACTCCTCA ATGCTGTTCA CCGCCGTCTC TCCAACCAGC
GGCTGGCGCC TGAACACCTT GCTGGCCACC ACCCACATCC CCCTCAACCA GATCCCTGAG
GCGCTGACCC CAGAGCTGGT GCACCACAAA CTGAACGTGC TGGAGGAGTT CTGTCGACGC
TTCACGAGCA CACCCCATCT GCGCATTGCC GGCCTGAATC CCCATGCCGG TGAAGCCGGT
CAACTGGGCC ACGAAGAAGC CGAATGGCTG CTGCCGCTGC TGGATCAATG GCGGAAGGAG
CATCCTCAGG TGCAGCTGGA GGGACCCGTT CCTCCCGACA CCTGCTGGAT CAGCGCTGCT
CGCGCTTGGC AGATGCCAAA CCAGGCAGGG CCCGACGGGA TCCTGGCCTT GTATCACGAC
CAGGGACTCA TTCCCGTGAA GCTGCTGGCC TTCGACGCTG CGGTGAACAC CACCTTGGAA
CTGCCGTTCC TGCGCACGTC CCCCGACCAT GGCACCGCCT TCGACATTGC AGCCCAAGGC
ATCGCCAGCC CTGAAAGCAC AACGGCAGCC ATTCAGGCCG CCTGGGACCT GAGCTGA
 
Protein sequence
MGPHDSTNPR HELVIALGDP AGIGMEVVLK ALASPTLPPA LQPLLVGCRR TLISTHARLQ 
RQTSHPLADP AALRIDDHPL EAGVQPGQPT TGGADAGFRW LTRAVELLQE RGSRALVTAP
IAKHLWHAAG HRYPGQTERL AELAGRQHSS MLFTAVSPTS GWRLNTLLAT THIPLNQIPE
ALTPELVHHK LNVLEEFCRR FTSTPHLRIA GLNPHAGEAG QLGHEEAEWL LPLLDQWRKE
HPQVQLEGPV PPDTCWISAA RAWQMPNQAG PDGILALYHD QGLIPVKLLA FDAAVNTTLE
LPFLRTSPDH GTAFDIAAQG IASPESTTAA IQAAWDLS