Gene Syncc9605_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0030 
Symbol 
ID3736393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp29810 
End bp30835 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content61% 
IMG OID637774610 
Productglyceraldehyde 3-phosphate dehydrogenase (NADP+) 
Protein accessionYP_380364 
Protein GI78211585 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.476761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC GCGTTGCGAT CAATGGATTC GGCCGGATCG GTCGCAATGT TCTGCGGGGA 
TGGATCAGCC GTGGCGCTGA CACCGGCCTG GAAATCGTGG GGATGAACTC CACCTCCGAC
CCCGCCACCA GCGCTCACCT GCTGACCTAC GACTCCATCC TTGGACGTCT TGATCCCTCG
GTGGACATCA AGACCACGGA CAGCTCAATG TTCGTCAACG GTAAGGAGAT CAAGTTCTTC
GCCGACCGCA ATCCCCTCAA CTGCCCCTGG AAGGAGTGGG GTGTTGACCT GGTGATCGAG
TCCACCGGTG TGTTCAACAC CGATGAGAAG GCCAGCATGC ACATCCAGGC TGGCGCCAAG
AAGGTGATCC TCACCGCCCC TGGCAAGGGT GATCGCGTCG GCACTTTCGT TGTGGGCGTC
AACGACGACC AGTACCGCCA CGAGGACTGG GACATCCTCA GCAACGCCAG CTGCACCACC
AACTGCTTGG CCCCGATCGT CAAGGTTTTG GACCAGAACT TCGGCCTTGA CTGGGGTCTG
ATGACCACCA TCCACAGCTA CACCGGCGAC CAGCGGATCT TGGATAACAG CCACCGCGAC
CTGCGCCGTG CCCGTGCTGC AGCTCTGAAC ATGGTTCCCA CCACCACCGG TGCAGCCAAG
GCCGTGGCTC TGGTTTACCC CGAGGTGAAG GGCAAGCTCA CCGGCTTCGC CATGCGCGTT
CCCACCCCGA ACGTCTCCGC TGTTGACCTC ACCTTCGGTC CCTCTCGCGC CGCCAGCGTT
GACGACATCA AGGCCGCCAT AAAGTCGGCT TCCGAGAACG GCATGAAGGG GATCATCAAG
TACGGCGATC TGCCCCTGGT GTCCACCGAC TACGCCGGCA CCAACGAGTC CACCATCTTT
GACGCCGACC TCACCTACGC CATGGGTGAC AAGGCTGTGA AGATCCTGGC CTGGTACGAC
AACGAGTGGG GCTACAGCCA GCGTGTTGTT GACCTCGCCG AGGTGGTGGC CAAGAACTGG
AAGTGA
 
Protein sequence
MTLRVAINGF GRIGRNVLRG WISRGADTGL EIVGMNSTSD PATSAHLLTY DSILGRLDPS 
VDIKTTDSSM FVNGKEIKFF ADRNPLNCPW KEWGVDLVIE STGVFNTDEK ASMHIQAGAK
KVILTAPGKG DRVGTFVVGV NDDQYRHEDW DILSNASCTT NCLAPIVKVL DQNFGLDWGL
MTTIHSYTGD QRILDNSHRD LRRARAAALN MVPTTTGAAK AVALVYPEVK GKLTGFAMRV
PTPNVSAVDL TFGPSRAASV DDIKAAIKSA SENGMKGIIK YGDLPLVSTD YAGTNESTIF
DADLTYAMGD KAVKILAWYD NEWGYSQRVV DLAEVVAKNW K