Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0030 |
Symbol | |
ID | 3736393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 29810 |
End bp | 30835 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637774610 |
Product | glyceraldehyde 3-phosphate dehydrogenase (NADP+) |
Protein accession | YP_380364 |
Protein GI | 78211585 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.476761 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGC GCGTTGCGAT CAATGGATTC GGCCGGATCG GTCGCAATGT TCTGCGGGGA TGGATCAGCC GTGGCGCTGA CACCGGCCTG GAAATCGTGG GGATGAACTC CACCTCCGAC CCCGCCACCA GCGCTCACCT GCTGACCTAC GACTCCATCC TTGGACGTCT TGATCCCTCG GTGGACATCA AGACCACGGA CAGCTCAATG TTCGTCAACG GTAAGGAGAT CAAGTTCTTC GCCGACCGCA ATCCCCTCAA CTGCCCCTGG AAGGAGTGGG GTGTTGACCT GGTGATCGAG TCCACCGGTG TGTTCAACAC CGATGAGAAG GCCAGCATGC ACATCCAGGC TGGCGCCAAG AAGGTGATCC TCACCGCCCC TGGCAAGGGT GATCGCGTCG GCACTTTCGT TGTGGGCGTC AACGACGACC AGTACCGCCA CGAGGACTGG GACATCCTCA GCAACGCCAG CTGCACCACC AACTGCTTGG CCCCGATCGT CAAGGTTTTG GACCAGAACT TCGGCCTTGA CTGGGGTCTG ATGACCACCA TCCACAGCTA CACCGGCGAC CAGCGGATCT TGGATAACAG CCACCGCGAC CTGCGCCGTG CCCGTGCTGC AGCTCTGAAC ATGGTTCCCA CCACCACCGG TGCAGCCAAG GCCGTGGCTC TGGTTTACCC CGAGGTGAAG GGCAAGCTCA CCGGCTTCGC CATGCGCGTT CCCACCCCGA ACGTCTCCGC TGTTGACCTC ACCTTCGGTC CCTCTCGCGC CGCCAGCGTT GACGACATCA AGGCCGCCAT AAAGTCGGCT TCCGAGAACG GCATGAAGGG GATCATCAAG TACGGCGATC TGCCCCTGGT GTCCACCGAC TACGCCGGCA CCAACGAGTC CACCATCTTT GACGCCGACC TCACCTACGC CATGGGTGAC AAGGCTGTGA AGATCCTGGC CTGGTACGAC AACGAGTGGG GCTACAGCCA GCGTGTTGTT GACCTCGCCG AGGTGGTGGC CAAGAACTGG AAGTGA
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Protein sequence | MTLRVAINGF GRIGRNVLRG WISRGADTGL EIVGMNSTSD PATSAHLLTY DSILGRLDPS VDIKTTDSSM FVNGKEIKFF ADRNPLNCPW KEWGVDLVIE STGVFNTDEK ASMHIQAGAK KVILTAPGKG DRVGTFVVGV NDDQYRHEDW DILSNASCTT NCLAPIVKVL DQNFGLDWGL MTTIHSYTGD QRILDNSHRD LRRARAAALN MVPTTTGAAK AVALVYPEVK GKLTGFAMRV PTPNVSAVDL TFGPSRAASV DDIKAAIKSA SENGMKGIIK YGDLPLVSTD YAGTNESTIF DADLTYAMGD KAVKILAWYD NEWGYSQRVV DLAEVVAKNW K
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