Gene Syncc9605_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0029 
SymbolmurC 
ID3736392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp28240 
End bp29649 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content63% 
IMG OID637774609 
ProductUDP-N-acetylmuramate--L-alanine ligase 
Protein accessionYP_380363 
Protein GI78211584 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGCGCC TGCTCGACCG TCAGACACCA GTCCACTTCA TCGGTGTCGG CGGAATTGGT 
ATGTCGGCTT TGGCCCGGAT TCTCGTCGAC CGCGGTCACT CGGTCAGCGG CTCAGACCCG
CGTGACAATG CGACAACACA ACAACTGAAG ACCCTTGGGG TGAAGGTCTT CCGTCAGCAG
GACGCCACCT GCATTGACGC CGTCACGGGA AGAACAGCCG CTGACTCACC GGTTGTGGTG
ATCAGCACAG CCATCCCCGA AAGCAATCCG GAACTGCAGC GGGCCCGACA GCAAGGGCTG
GAGATCTGGC ATCGCTCCGA TCTCCTGGCG GCTCTGATCG AGCAGCAACC CTCCATTGCA
GTCGCCGGCA GCCACGGCAA GACCACCACC AGCACCTTGA TCACCACCTT GCTGCTGGAG
GCCGATCAGG ACCCAACCGC TGTGATTGGA GGCATCGTCC CCAGCCTCGG CAGCAATGGC
CATTCCGGCC AGGGGAAGCT GCTTGTGGCC GAGGCGGATG AATCCGACGG GTCCCTGGTG
AAGTTCAGCC CCAGCCTGGG GGTGATCACC AACCTGGAGC TGGATCACAC CGATCACTAC
TCCTGCCTCG ACGACCTGAT CTCCACCCTG CAACGCTTCG CGGGGGGTTG CGATCGCGTG
CTGGCCAATC ACGACTGCCC GATCCTGCAG GAACACTTCC AGCCAACGGC CTGGTGGTCC
AACCAAAGCG ACGAATCTGT TGACTTCGCC GCCCTGCCCT TAAGCCTGGA CGGTGATCGC
TGCGTCGCCC GTTTCTATGA AGCCGGCCAG CCCGTCGGCG ACTTCACCCT GCCGATGGCT
GGGCTGCACA ACCTGAGCAA TGCGACAGGC GCCTTGGCTG CCTGCCGGAT GGAAGGGCTC
CCCTTCAACC AGTTGGTAGA GGGCCTCGCT GGCCTGAAGG CACCGGGCCG CCGCTTTGAC
CTTCGGGGCA CCTGGAAGGG TCGTCACATC GTTGATGACT ACGCCCACCA TCCCAGTGAG
GTGCAGGCAA CCCTGGAGAT GGCACGCCTG ATGGTGCGCA GTGGCCGCAG TCCACTCCCC
TCAGCACCAC AGCGGCTGCT GGCGGTGTTC CAGCCGCACC GCTACAGCCG CACCAGGCAG
TTCCTCGATG GCTTCGCCAA AGCCCTGCAG AACTGTGATC TGCTGCTGCT GGCTCCCGTC
TATCCCGCAG GAGAGCAACC GCTGCAGGGC ATCAGCAGCA ACGCCCTGGC GGATCGGGTG
CGCAAGCTGA AACCGGATCT GGAGATCGCC GTCGCAGAAA ACCTCGATCA ACTCACCGAG
CTGGTGATTC AGCACAGCCT CGAGAACGAT CTTGTTCTGG CCATGGGTGC TGGCGACGTG
AATGGACTGT GGTCAAGGCT GACGTCATGA
 
Protein sequence
MPRLLDRQTP VHFIGVGGIG MSALARILVD RGHSVSGSDP RDNATTQQLK TLGVKVFRQQ 
DATCIDAVTG RTAADSPVVV ISTAIPESNP ELQRARQQGL EIWHRSDLLA ALIEQQPSIA
VAGSHGKTTT STLITTLLLE ADQDPTAVIG GIVPSLGSNG HSGQGKLLVA EADESDGSLV
KFSPSLGVIT NLELDHTDHY SCLDDLISTL QRFAGGCDRV LANHDCPILQ EHFQPTAWWS
NQSDESVDFA ALPLSLDGDR CVARFYEAGQ PVGDFTLPMA GLHNLSNATG ALAACRMEGL
PFNQLVEGLA GLKAPGRRFD LRGTWKGRHI VDDYAHHPSE VQATLEMARL MVRSGRSPLP
SAPQRLLAVF QPHRYSRTRQ FLDGFAKALQ NCDLLLLAPV YPAGEQPLQG ISSNALADRV
RKLKPDLEIA VAENLDQLTE LVIQHSLEND LVLAMGAGDV NGLWSRLTS