Gene Syncc9605_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0023 
Symbol 
ID3735546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp24056 
End bp24733 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content64% 
IMG OID637774603 
Productheat shock protein GrpE 
Protein accessionYP_380357 
Protein GI78211578 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG ACGCCTCCAC CCCAGAGCAG GACCAGAACG TTGTGTCCGG TGCTGTTCCA 
GCCACGCGGG AGTCCTCTCC GGATGCGCCC GAGGCGACGT CTGAACAGGC CTCTGCAGCG
GTGGATCCGG CGGATCGGAT GCAGCAGCTC GAGCAGGAAT TGAGCGCGTT GAAGCAGGAG
CACGACACGC TCAACAGCCA ATACATGCGC ATTGCGGCGG ATTTCGACAA CTTCCGCAAG
CGCCAGAGCC GCGACCAGGA CGACATGCGT AAACAGCTGG TCTGCTCGAC CCTCACGGAG
ATTCTCCCCG TCGTCGACAA CTTCGAGCGA GCCCGTCAGC AGCTGAATCC TGAAGGGGAG
GAAGCCCAGG CGCTGCATCG CAGTTACCAG GGTCTGTACA AGCAACTGGT GGAGGTGCTG
AAGCAGCAGG GGGTGGCCCG GATGGATGTG GTTGGTCAGG AGTTCGACCC GAATCTGCAT
GAGGCCGTGC TGCGGGAGGA AAGCAGCGAG TTCGCTGAGG ACGTGGTGAG CGAGGAGCTT
CAGCGCGGCT ACCACCGCGA CGGGCGTGTG CTGCGCCACG CCATGGTGAA GGTGTCGATG
GGTCCAGGAC CATCCGATCC AGGCTCAGCG CCTGCTGAAG CGGCAGCGGC ACCGGATCAG
ACGGCGGAGG AGGCCTGA
 
Protein sequence
MSGDASTPEQ DQNVVSGAVP ATRESSPDAP EATSEQASAA VDPADRMQQL EQELSALKQE 
HDTLNSQYMR IAADFDNFRK RQSRDQDDMR KQLVCSTLTE ILPVVDNFER ARQQLNPEGE
EAQALHRSYQ GLYKQLVEVL KQQGVARMDV VGQEFDPNLH EAVLREESSE FAEDVVSEEL
QRGYHRDGRV LRHAMVKVSM GPGPSDPGSA PAEAAAAPDQ TAEEA