Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0019 |
Symbol | |
ID | 3735542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 21023 |
End bp | 22105 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637774602 |
Product | twitching motility protein |
Protein accession | YP_380356 |
Protein GI | 78211577 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTGA TGATCGAAGC CTTGATGGAA CAACTGGTGC AGGGCGGTGG CAGTGATCTG CACCTGGCCA CCGGTCAACC GCCCTACGGC CGCTTCAGTG GTGAACTGCG TCCGATGACG GACCGACCCC TGGCCGAGGA GGAATGCAAC AAACTGATCT TCTCGATGTT GAACAACAGC CAGCGCAAGA CGCTGGAGCA GACCTGGGAA CTGGACTGCG CCTACGGCCT CAAGGGCGTT GCACGCTTCC GCGTGAACGT CTACCGCCAG AAAGGCAGCT ATGCCGCCTG CCTGCGAGCC CTTGGCAGCA CGATTCCCAG CGTTGAACTG CTGAACCTGC CTCCTGTGGT GCTGGAGACC AGCGCGCGGC CCCGGGGTCT GGTGCTGGTG ACGGGTCCAA CAGGCTCAGG GAAGACAACA ACCCTGGCGG CTCTGTTGGA TCTCATCAAT CACACCCGCA GCGAACACAT CCTCACGATC GAAGACCCGA TCGAATTCGT GTACCAGAGC GACAAAAGCC TGGTGCACCA ACGCCAGCTG AACGAAGACA CCCGCAGCTT CGCCAACGCC TTGCGCGCCG CCCTGCGGGA GGACCCGAAC GTGATCCTGG TGGGTGAGAT GCGGGATCTG GAGATGATTC AACTGGCGGT GAGTGCCGCC GAAACCGGAC ATCTCGTCTT CGGAGCCTTG TATACCAGCT CCGCCGCCCA GACCGTGGAC CGCATGGTCG ACGTCTTCCC ACCGGAACAA CAGACGCAGA TCCGTGTCCA GCTCTCGGGC AGTTTGGTCG CTGTGTTCTG CCAGACCCTT TGCCGGCGTC AGAACCCGTC AGAAGGACAG TTCGGTCGGG TGATGGCCCA GGAGATCCTG ATCAACACAC CTGGACCTGG CACCGCCAAC ATGATCCGCG AGGGGAAAAC AGCCCAGCTC TATTCCCAAA TCCAGACGGG GACAGAACAA GGTATGCAGA CCCTGGAGAA AGCCTTGGCC AACCTTGTGC TCAATGGGGA TGTATCCCGC GCCGAAGCGA TGGGCAAAGC CAGCAAACCA GGCGAATTGC AGCGCTTGAT CGGTGAAATC TGA
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Protein sequence | MDLMIEALME QLVQGGGSDL HLATGQPPYG RFSGELRPMT DRPLAEEECN KLIFSMLNNS QRKTLEQTWE LDCAYGLKGV ARFRVNVYRQ KGSYAACLRA LGSTIPSVEL LNLPPVVLET SARPRGLVLV TGPTGSGKTT TLAALLDLIN HTRSEHILTI EDPIEFVYQS DKSLVHQRQL NEDTRSFANA LRAALREDPN VILVGEMRDL EMIQLAVSAA ETGHLVFGAL YTSSAAQTVD RMVDVFPPEQ QTQIRVQLSG SLVAVFCQTL CRRQNPSEGQ FGRVMAQEIL INTPGPGTAN MIREGKTAQL YSQIQTGTEQ GMQTLEKALA NLVLNGDVSR AEAMGKASKP GELQRLIGEI
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